Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1164 ATGGCAGAGAGTTCAGTATCATTTTTGTTGGAGAAGCTAACTTGGTTACTTCAAGAAGAGGTAAATCTACAAAGAGGCGTCCGTGAAGATGTTCAATACATCAACGACGAACTCGAACGCCACAAGGCCATCTTGATGGCAGCTGATTCAATGGAAGACAAAGACCCTGAACTCAAAGTATGGGTTAAAAGGGTTAGAGTTATTGCTCAAGACATGGAAGATGCTATAGATGAATACTATCTTCGCCTTGTCGATCATCAACAAGGAAAAATCAGATCTTATTTTCACAAGATTCTTTTCGGCATTAAGACCATGAAAGCTAGACACAAAATAGCTTCAAATATACAAGGAATCAAATCAAAAGTTGAAGTTATCTTGCGTAGGCGTCCAATCATACCTGATGTAGCTTCAAGCTCAAGTCAAAGGTTTTCATCAAGGCTTGATAGTCAAGGTGATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGATCAACCAAAGAAGCAGCTGACTGATTTGCTTTTCAAAGATGAATCAAAGAGAGAAGTGATTTCGATCTATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTTTATGATGATCCAAAAGTCAAGAAACGTTTCAGGATTCATGCTTGGGTTAATCTCTCCCAATCTATCAAAATGGAAGAGATACTGAAAGACCTTGTACAAAAACTCCATAATGTTTTTGGAAAACCTGCTCCAGGATCAATTGGAACGATGAATAATGACGATCTGAAAGAGTTGATAAAGAATTTGCTTCAGAGAAGCAGGTATCTAATTGTTCTTGATGATGTATGGAATGTGAAAGTATGGGACGATGTGAAGCATTCCTTGCCTAATAACAACCGTGGAAGTAGAGTGATGCTTACCACACGCAAGAAAGATATAGTTCGTGCTGAATTAGGTAAGGACTTTCACCTTGCATTCTTACCTGAGCAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGGTAATTCATGTCCTCCTCATCTTGAAGAAGTTTGTAGGAATATCTTGAAATTGTGTGGAGGGTTGCCACTAGCAATTGTAGCAATAAGTGGTGCTTTGGCTACAAGAGGAAGAACAAACATAGAAGAGTGGCAGATAGTTTGCAGAAGTTTTGGTTCTGAAATTGAAGGCAATGACAAACTCGAAGATATGAAAAAAGTACTTTCCTTAAGTTTCAATGAATTGCCTTACCATCTTAAATCATGTTTGTTGTATTTAAGCATCTTTCCGGAGTTTCACGCTATCGAGCATATGAGATTGATTCGATTGTTGATAGCTGAAGGATTTGTAAATAGTGAAAATGGCAAGACACTAGAGGAAGTTGCAGATCGTTACCTTAAGGAGCTTTTGAACAGAAGTTTGCTCCAAGTGGTAGAAAAAACCAGTGATGGAAGGATAAAGACTTGTCGAATGCATGACCTTCTAAGAGAAATTGTTAATTTCAAGTCAAGGGATCAGAACTTTGCAACAGTAGCCAAAGAACAAGATATGGTATGGCCGGAACGAGTTCGTCGTTTATCAGTCATAAATTCGTCACATAATGTACATAAACAGAACAAGACCATATTCAAACTTAGGTCTCTGCTAATGTTTGCAATATCAGATTCAGTCAATCATTTTTCTATCCATGAATTATGCTCCTCCACTGGTGTTAAGTTGCTCAATGTACTAGACTTGCAGGATGCACCTTTGGAGGATTTTCCTGTTGAAATTGTAAACCTTTACCTTCTGAAGCATCTAAGTTTGAAAAATACAAAGGTGAAAAGCATTCCAGGTTCAATTAAGAAGCTGAAATACTTGGAAACATTGGATCTTAAGCACACTTATGTCACGGAATTGCCTGTTGAAGTTGCGGAGCTGAAACGGTTACGCCATCTCCTGGTGTATCGCTATGAAATTGAATCCTATGCTCATTTCCACTCAAGGCATGGCTTCAAGGTGGCTGCACCTATAGGAAACATGCTATCATTGCAAAAGCTTTGTTTCATAGAGGTAGATCAAGGAAGCAGAGCCTTGATGGTAGAGTTAGGAAAACTCACTCAACTTAGGAGGCTAGGCATAAGAAAAATGAGGAAAGAAGACGGTGCTGCTTTGTGTTCATCTATTGAGAAGATGATCAATCTTAGATCACTTAACATAACTGCAATAGAAGATGACGAGATAATCGATATTCACAACATTTCGAAGCCTCCTCAGTATCTTCAGCAGCTATACTTGAGCGGTCGTTTAGAGAAGTTTCCTCAATGGATAAATTCTCTCAAGAATTTGGTCAAAGTTTTCTTAAAATGGAGCAGGTTAAAGGAGGATCCTCTTGTGTATCTTCAAGATTTGCCAAATCTTCGACATCTTGAGTTTCTTCAAGTTTATGTTGGTGATACATTGAATTTCAATGCAAAAGGGTTTCCAAGTCTAAAGGTGTTAGGGCTTGATGATTTAGAAGGACTCAAACATATGATAATTGAAGAAGGAGCAATGCAAAGTCTTAAGAAGTTGGTTATGCAACGATGTGGTTCATTCAAGAATGTACCATTAGGCATTGAACACTTAACTAAGCTAAAAACAATCGAGTTCTTCGATATGCCTGATGAATTGATTATGGCACTCCGTCCAAATGTAGGGGCAGATTATTGGAGAGTACAAAATGTTCCAACAGTTTATTCTACTTATTGGAGGGATGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAGAGAGCGATTCCAATCATAGTAGCGCAAAGAGGACTCGTGAGCTTCCTACTCTTTGGAAGGTTTAA 2835 0.3852 MAESSVSFLLEKLTWLLQEEVNLQRGVREDVQYINDELERHKAILMAADSMEDKDPELKVWVKRVRVIAQDMEDAIDEYYLRLVDHQQGKIRSYFHKILFGIKTMKARHKIASNIQGIKSKVEVILRRRPIIPDVASSSSQRFSSRLDSQGDALLLEEADLVGIDQPKKQLTDLLFKDESKREVISIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVNLSQSIKMEEILKDLVQKLHNVFGKPAPGSIGTMNNDDLKELIKNLLQRSRYLIVLDDVWNVKVWDDVKHSLPNNNRGSRVMLTTRKKDIVRAELGKDFHLAFLPEQEAWSLFCRKTFQGNSCPPHLEEVCRNILKLCGGLPLAIVAISGALATRGRTNIEEWQIVCRSFGSEIEGNDKLEDMKKVLSLSFNELPYHLKSCLLYLSIFPEFHAIEHMRLIRLLIAEGFVNSENGKTLEEVADRYLKELLNRSLLQVVEKTSDGRIKTCRMHDLLREIVNFKSRDQNFATVAKEQDMVWPERVRRLSVINSSHNVHKQNKTIFKLRSLLMFAISDSVNHFSIHELCSSTGVKLLNVLDLQDAPLEDFPVEIVNLYLLKHLSLKNTKVKSIPGSIKKLKYLETLDLKHTYVTELPVEVAELKRLRHLLVYRYEIESYAHFHSRHGFKVAAPIGNMLSLQKLCFIEVDQGSRALMVELGKLTQLRRLGIRKMRKEDGAALCSSIEKMINLRSLNITAIEDDEIIDIHNISKPPQYLQQLYLSGRLEKFPQWINSLKNLVKVFLKWSRLKEDPLVYLQDLPNLRHLEFLQVYVGDTLNFNAKGFPSLKVLGLDDLEGLKHMIIEEGAMQSLKKLVMQRCGSFKNVPLGIEHLTKLKTIEFFDMPDELIMALRPNVGADYWRVQNVPTVYSTYWRDGGWDVYSLETFGERESDSNHSSAKRTRELPTLWKV* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1164 944 Gene3D - 321 408 IPR042197 -
Mtr5g1164 944 Gene3D - 5 112 - -
Mtr5g1164 944 Pfam NB-ARC domain 166 410 IPR002182 GO:0043531
Mtr5g1164 944 SUPERFAMILY L domain-like 487 884 - -
Mtr5g1164 944 Pfam Rx N-terminal domain 6 88 IPR041118 -
Mtr5g1164 944 CDD RX-CC_like 2 125 IPR038005 -
Mtr5g1164 944 Gene3D - 409 494 IPR036388 -
Mtr5g1164 944 PANTHER OS08G0539900 PROTEIN 154 903 - -
Mtr5g1164 944 PANTHER OS08G0539900 PROTEIN 1 136 - -
Mtr5g1164 944 Gene3D Ribonuclease Inhibitor 495 882 IPR032675 -
Mtr5g1164 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 423 IPR027417 -
Mtr5g1164 944 PANTHER DISEASE RESISTANCE PROTEIN RP 154 903 IPR044974 GO:0006952
Mtr5g1164 944 PANTHER DISEASE RESISTANCE PROTEIN RP 1 136 IPR044974 GO:0006952
Mtr5g1164 944 Gene3D - 150 315 IPR027417 -
Mtr5g1164 944 PRINTS Disease resistance protein signature 184 199 - -
Mtr5g1164 944 PRINTS Disease resistance protein signature 264 278 - -
Mtr5g1164 944 PRINTS Disease resistance protein signature 356 370 - -
Mtr5g1164 944 PRINTS Disease resistance protein signature 612 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1164 Mtr-Chr5 11668721 11672489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1164 184 827 WRKY Transcription Factor Family AT5G45050 23.033 6.54e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1164 K13457 - gmx:100305458 1441.4