Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1162 ATGGCAGATAGTTCAGTATCATTTTTATTGGACAAACTGAGTTGGTTACTTCAAGAAGAAGTAATTCTACAAAAAGGGGTCCGTGAAGATGTTCAATACATCAAAGACGAACTCAAACGCCACAATGCCATCTTAACGAGAGATGATGCATTGGAAGACAAAGATCCTGAACTCAAAGTATGGGTTAAAAGGGTAAGAGATATTGCTCAAGATATGGAAGATGCTATAGATGAATACAATCTTCGCCTTGTCGATCATCGACAAGGGAACAACAAAAATTCTTCTTTTCACAAGGTTGCTTTTGACATCAAGACCATGAAACCTAGACACAGAATAGCTTCAGATATTAAAAAAATCAAATCCAAAGTTGAAGCTATCACTCAAGGACGTCCAATGATATCTGGTGTAGGTTCAAGCTCAAGTCAAAGGCGTTCATCAAGGCTTGATAGTCAAGGTGATGCCCTTTTGCTAGATGAAGCTGATTTAGTTGGAATTGATCAACCAAAGAAGCAGCTGTGTGATTTGCTTTTCAATGATGAACCAAAGAGAGAAGTGATTTCAATCTATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTCTATGATGATCCAAAAGTCAAGAAACATTTCAGGATTCATGCTTGGGTTAATCTCTCCCAATCTATCAAAATGGAAGAGATACTGAAAGACCTTGTACAAAAACTCCATAATGTTTTTGGAAAACCTGCTCCAGAATCAATTGGAACGATGAATAATGACGATCTGAAAAAGTTTATCCAGAATTTTCTTCAGAGAAGTCAGAAGTATCTAATAGTGCTTGATGATGTGTGGCATGTGAAAGTATGGGATGGCCTCAATCATGCTTTTCCTAATAACAACCGTGGAAGTAGAGTGATGCTTACGACGCGCAAGAGAGATATAGCTTTGTATTCTTGTGCTGGATTGGGTAAGGATTTTCATCTTGAATTCTTACCTGAGAAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGATAATTCATGTCCTCCTCATCTTGAAGAAGTTTGTAGGAATATCTTGAAATTGTGTGGAGGGTTGCCACTAGCAATTGTGGCAATCAGTGGTGCTTTGGCGACAAAAGAAAGATCAAACATAGAAGAATGGCAGATAGTTTGCAGAAGTTTTGGTTCTGAGATTGAAGGCAATGACAAATTGGAAGATATGAATAAAGTAATTTCATTAAGTTTAAATGAGTTACCTTCTTATCTTAAATCATGTTTGATGTATTTAACCATCTTTCCGGAATTTCACGCTATGGAGACTTGGAGATTGATTCGGTTGTGGATAGCTGAAGGGTTTGTAAATGGTGAAGATGGTAAGACACTTGAGGAAGTTGCAGACAGTTATCTTAAGGAGCTTTTGGACAGAAGTTTAATCCAAGTTGTGGAAAAAACCAGTGATGGAAGGATGAAGACGTGTCGAATGCACGGTCTTCTAAGGGAAATTGTTAATTCTAAGTCAAGAGATCAGAACTTTGCAACAATAGTTAAAGAACAAGATATGGTATGGCCTGAGCGAGTTCGACGTTTATCGGTCATAAATCCTTCGCATAATGTATTACAACAAAATACGACTACATTTCATCTTAGGTCTCTGCTAATGTTTGGATTATCAGATTTACTCAATCAGTTTTCTCTTCATGAATTATGCTCCTCCAATGGTGTTCAATTTCTCAATGTACTAGACTTGCAGGATGCACCTTTGGATGATTTTCCTGCTGAAATTGTCAACCTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTGAAAAATATTCCAGGTTCCATTAAGAGGCTGCAAAACCTTGAGACATTGGATCTTAAGCACACGTCTGTAACTGAACTGCCTGTTGAAATTGCGGAGCTGAAACGGTTACGCCATCTCCTCGTGTATCGTTACGAGATTGAATCTTATGCTAAATTCCACTCAAGGCATGGCTTCAAGGTGGCTGCACCTATAGGAAACATGCTATCATTGCAGAAGCTTTGTTTCATAGAGGTAGATCAAGGAAGTGCAGCCTTGATGGTTGAGCTAGGAAAACTTACTCAACTTAGGAGGCTAGGCATAAGAAAAATGAGGAAAGAAGATGGTGCTGCTTTGTGTTCATCCATTGAGAAGATGATCCATCTTAGGTCACTCTCCATATTTGCTATAGAAGAAGACGAGGTAATCGATATTCATGACATTTCAAACCCTCCTCGCTATCTTCAGCAGTTATACTTGAGCGGTCGCTTAGAGAAGTTTCCACAATGGATAAATTCTTGCAAGAACTTGGCTAGAGTTTTCTTAAAGTGGAGCAAGTTAGAGGAGGATCCTCTTGTGTATCTTCAAGGTTTGCCAAATCTTCGACATCTTGAATTACTTCAAGTATATGTTGGTGAAATGTTGCATTTCAATGCAAAAGGGTTTCCAAGTCTAAAGGTGTTAGGCCTTGATTATTTAGAAGGACTCAAATATATGACAATCGAAGAAGGAGCAATGCAAGGTCTTAAGAAGTTGGTCATGCAACGATGTAGTTCATTCAAGAATGTACCAGTAGGGATTGAACACTTGGCTAAGCTAAAAGCAATTGAGTTCTTTGATATGCCTGATGAGTTGATTATGGATCTGCGTCCAAATGGAGGCAAAGATTTTTGGAGAGTACAAAATGTTCCAACAGTTTATTCTACTTATTGGAGGAATGATGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGATATAGAGAGTGATGTTGACCATCGTATAGCAATGAGGACTCTTCAGCTTCCTACTCTTTGGAAGGCTTAA 2850 0.3835 MADSSVSFLLDKLSWLLQEEVILQKGVREDVQYIKDELKRHNAILTRDDALEDKDPELKVWVKRVRDIAQDMEDAIDEYNLRLVDHRQGNNKNSSFHKVAFDIKTMKPRHRIASDIKKIKSKVEAITQGRPMISGVGSSSSQRRSSRLDSQGDALLLDEADLVGIDQPKKQLCDLLFNDEPKREVISIYGMGGLGKTTLAKQVYDDPKVKKHFRIHAWVNLSQSIKMEEILKDLVQKLHNVFGKPAPESIGTMNNDDLKKFIQNFLQRSQKYLIVLDDVWHVKVWDGLNHAFPNNNRGSRVMLTTRKRDIALYSCAGLGKDFHLEFLPEKEAWSLFCRKTFQDNSCPPHLEEVCRNILKLCGGLPLAIVAISGALATKERSNIEEWQIVCRSFGSEIEGNDKLEDMNKVISLSLNELPSYLKSCLMYLTIFPEFHAMETWRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLDRSLIQVVEKTSDGRMKTCRMHGLLREIVNSKSRDQNFATIVKEQDMVWPERVRRLSVINPSHNVLQQNTTTFHLRSLLMFGLSDLLNQFSLHELCSSNGVQFLNVLDLQDAPLDDFPAEIVNLYLLKYLSLKNTKVKNIPGSIKRLQNLETLDLKHTSVTELPVEIAELKRLRHLLVYRYEIESYAKFHSRHGFKVAAPIGNMLSLQKLCFIEVDQGSAALMVELGKLTQLRRLGIRKMRKEDGAALCSSIEKMIHLRSLSIFAIEEDEVIDIHDISNPPRYLQQLYLSGRLEKFPQWINSCKNLARVFLKWSKLEEDPLVYLQGLPNLRHLELLQVYVGEMLHFNAKGFPSLKVLGLDYLEGLKYMTIEEGAMQGLKKLVMQRCSSFKNVPVGIEHLAKLKAIEFFDMPDELIMDLRPNGGKDFWRVQNVPTVYSTYWRNDGWDVYSLETFGDIESDVDHRIAMRTLQLPTLWKA* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1162 949 Gene3D - 326 412 IPR042197 -
Mtr5g1162 949 PRINTS Disease resistance protein signature 185 200 - -
Mtr5g1162 949 PRINTS Disease resistance protein signature 266 280 - -
Mtr5g1162 949 PRINTS Disease resistance protein signature 361 375 - -
Mtr5g1162 949 PRINTS Disease resistance protein signature 617 633 - -
Mtr5g1162 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 428 IPR027417 -
Mtr5g1162 949 Gene3D - 151 315 IPR027417 -
Mtr5g1162 949 PANTHER DISEASE RESISTANCE PROTEIN RP 155 907 IPR044974 GO:0006952
Mtr5g1162 949 PANTHER DISEASE RESISTANCE PROTEIN RP 1 140 IPR044974 GO:0006952
Mtr5g1162 949 SUPERFAMILY L domain-like 492 886 - -
Mtr5g1162 949 PANTHER OS08G0539900 PROTEIN 155 907 - -
Mtr5g1162 949 PANTHER OS08G0539900 PROTEIN 1 140 - -
Mtr5g1162 949 MobiDBLite consensus disorder prediction 131 150 - -
Mtr5g1162 949 Pfam Rx N-terminal domain 6 92 IPR041118 -
Mtr5g1162 949 MobiDBLite consensus disorder prediction 132 149 - -
Mtr5g1162 949 Gene3D Ribonuclease Inhibitor 506 665 IPR032675 -
Mtr5g1162 949 Pfam NB-ARC domain 167 414 IPR002182 GO:0043531
Mtr5g1162 949 Gene3D - 413 505 IPR036388 -
Mtr5g1162 949 Coils Coil 62 82 - -
Mtr5g1162 949 CDD RX-CC_like 2 127 IPR038005 -
Mtr5g1162 949 Gene3D - 5 113 - -
Mtr5g1162 949 Gene3D Ribonuclease Inhibitor 668 887 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1162 Mtr-Chr5 11650192 11654047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1162 185 380 WRKY Transcription Factor Family AT5G45050 26.904 6.45e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1162 K13457 - gmx:100305458 1399.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1162 5 11650192 11654047 Mtr5g1162 5 11650192 11654047 ECH