Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1156 ATGGCAGCTTGTACTGTCTACTCAACACAACCTCTAAGAACAAACATCTCAATTCCAACATCATCAAAAACACATGTTGGTTTTAATCAAAAACAGGTAGTGTTCTACACAACAACCAAAAAGAGCAGCAACAGAAGAACTAACAGTAACAACAGAAGATACCTGATAACATGTGGAGCAGGTGACTCACAGACAATTGTGATTGGTCTAGCAGCTGATTCAGGATGTGGAAAAAGTACTTTCATGAGAAGACTCACAAGTGTTTTTGGAGGTGCAGCAGAACCACCAAAAGGTGGAAATCCTGACTCAAACACACTTATCAGTGACACAACCACTGTGATATGTTTGGATGATTACCATTCTTTGGATAGAACTGGTAGAAAAGAGAAAGGTGTTACTGCACTTGATCCAAGAGCTAATGATTTTGATCTTATGTATGAACAAGTTAAAGCTATTAAAGAGGGTGTTTCTGTTCAAAAACCTATTTATAATCATGTTACTGGTCTTTTAGATCCTCCTGAGCTTATTAAACCACCCAAAATCTTGGTCATTGAAGGTCTTCACCCAATGTATGATTCTCGAGTTAGAGATCTTTTGGACTTCAGTATCTACTTAGATATTAGCAATGAGGTGAAATTTGCTTGGAAAATTCAGAGAGACATGGCGGAACGTGGACACAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTATATTGATCCACAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTAATTCCTGATGATAATGAAGGAAAGATTTTAAGAGTGAGGTTGATCCAGAAAGAGGGTGTTAAATATTTTAGCCCAGTTTACTTGTTTGATGATGGTTCTACAATTTCATGGATACCATGTGGAAGGAAACTTACATGCTCTTATCCTGGCATTAAATTTTCCTATGGACCAGAGACTTACAAAGGAAATGAGGTGTCAGTTGTGGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATATGTTGAGAGCCACTTAAGCAACCTATCTTCCAAATTCTATGGAGAAGTTACTCAACAAATGTTGAAGCATGCTGATTTCCCTGGTAGCAACAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATTTGAGCAGATAGTAGCAAGCAGGGCTGAGACTCCAGTAGGAGCAGCTAAAGCTTAG 1236 0.3843 MAACTVYSTQPLRTNISIPTSSKTHVGFNQKQVVFYTTTKKSSNRRTNSNNRRYLITCGAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGVSVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFSYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1156 411 PANTHER PHOSPHORIBULOKINASE 7 411 - -
Mtr5g1156 411 PANTHER URIDINE KINASE 7 411 - -
Mtr5g1156 411 PRINTS Phosphoribulokinase family signature 72 89 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mtr5g1156 411 PRINTS Phosphoribulokinase family signature 181 199 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mtr5g1156 411 PRINTS Phosphoribulokinase family signature 216 233 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mtr5g1156 411 PRINTS Phosphoribulokinase family signature 234 257 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mtr5g1156 411 CDD PRK 67 355 - -
Mtr5g1156 411 Gene3D - 62 299 IPR027417 -
Mtr5g1156 411 Pfam Phosphoribulokinase / Uridine kinase family 67 265 IPR006083 GO:0005524|GO:0016301
Mtr5g1156 411 ProSitePatterns Phosphoribulokinase signature. 216 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mtr5g1156 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 335 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1156 119 293 PRT Gene Family AT3G27440 25.843 2.28e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1156 K00855 - gmx:100807126 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1156 5 11504173 11507678 Mtr5g1156 5 11504173 11507678 ECH