Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1152 ATGGCTGCAAATTTCAACTGTGACATGCCACAAAATACCATCACTCACCCTTCTTGGTATTCACCAAAAACCGGAATTTACAATAGTATACACTCTCCTAGGAGCCTTCCGACCGACCCTTTTCTCGACGTTGTATGCTTCATTTTTTCTCATCCTCATGACGGGGTTTTAGCCCTTATTGATTCCTTATCTGGGACTTCCATTTCTTACTCAAATTTGTTAACTTTAGTCAAATCCTTGGCTTCTGGTCTTCATAAAATGGGTGTTTCACAAGGTGATGTTGTTTTGCTTTTACTTCCCAATTCAATTTACTATCCTATTGCATTATTGAGTGTTATGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTTGATGAAATTCGTAAGCGGGTTAATGACTGTGGTGTGAGTTTTGCTTTTACTATACCTGAAAATGTAAAGAAATTAGAACCATTAGGCATTCCTATTATTTCTGTGCCAGAAAATGAAAAGGATTTGAAGCATGCTTGTTTCTCATGTTTTTTTAACCTGATTTCTGGTAACTTTGTTTTGCCTCAAAAGTCGGTTATTAAACAAGAAGACACTGCTGCTATATTGTTTTCTTCTGGTACTACTGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGAGCTTTCGGCAAGGTTTGAAGCTTCTAAATATGAATACTCTAGTTCCAAAAATGTGTATCTAGATGTTTTGCCGATGTTCCATTTATATGGTTTATCTCTATTTGCTACGGGATTATTGTCATTGGGTTCTACAATCGTTGTAATGCGGAAATTTGACATTGATGAGACTATTAGGGTGATCGATAAATATAATGTTACACACTTTCATGTTGTTCCACCGATATTGACGGCATTGACAGCGAAGGCAAAGGGTGTAAATGGAAGTAAGTTGCAGAGTTTGAGACAGGTCGGTTCTAGTGCAGCGCCTTTAACCACAAAAGCTATAAATGATTTTGTCCAAGCTTTCCCTCATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGGGCACAGTAGGAGCATGCGGTTTCAATACAGAAAAATTTCGCAACTATTCCTCGCTAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGATTGGAATAGTGGTGCTTTTTTGCCCCCAGGCAGAAGTGGTGAGCTTTGGTTGAGAGGGCCTTCAACCATGAAAGGATACTTGAATAATGAGGAAGCTACAATGTCAACAGTTGATAAAGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTGTCTGACCGCTTGAAAGAATTTATCAAATACAAGGGCTTTCAGATTCCTCCTGCTGATTTAGAAGCTGTTTTAATTTTGCATCCTGAAATAGCTGATGTCGCCGTTACAGGTGCAAAGGATGAAGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTCAAGAAGGTTGGAAGTGTACTTTCTCCAAAGGATGTTATCGATTTCGTTGCTAAGCAGGTTGCTCCATTCAAGAAGGTTCGCAAAGTGGTCTTCACCGACAAGATTCCGAGGTCTGTGACTGGGAAGATACTCCGAAAGCAACTCAGAAACTGCTTGCCTTCTAAACTCTAA 1668 0.3921 MAANFNCDMPQNTITHPSWYSPKTGIYNSIHSPRSLPTDPFLDVVCFIFSHPHDGVLALIDSLSGTSISYSNLLTLVKSLASGLHKMGVSQGDVVLLLLPNSIYYPIALLSVMYLGAVVTPLNPLSSVDEIRKRVNDCGVSFAFTIPENVKKLEPLGIPIISVPENEKDLKHACFSCFFNLISGNFVLPQKSVIKQEDTAAILFSSGTTGVSKGVVLTHRNLIAMVELSARFEASKYEYSSSKNVYLDVLPMFHLYGLSLFATGLLSLGSTIVVMRKFDIDETIRVIDKYNVTHFHVVPPILTALTAKAKGVNGSKLQSLRQVGSSAAPLTTKAINDFVQAFPHVDFIQGYGMTESGTVGACGFNTEKFRNYSSLGLLAPNMEAKVVDWNSGAFLPPGRSGELWLRGPSTMKGYLNNEEATMSTVDKDGWLHTGDIVYFDQDGYLYLSDRLKEFIKYKGFQIPPADLEAVLILHPEIADVAVTGAKDEEAGEIPVAFVVKKVGSVLSPKDVIDFVAKQVAPFKKVRKVVFTDKIPRSVTGKILRKQLRNCLPSKL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1152 555 CDD 4CL 36 547 - -
Mtr5g1152 555 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Mtr5g1152 555 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 14 554 - -
Mtr5g1152 555 Gene3D - 453 552 IPR045851 -
Mtr5g1152 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 554 - -
Mtr5g1152 555 Pfam AMP-binding enzyme 57 457 IPR000873 -
Mtr5g1152 555 SUPERFAMILY Acetyl-CoA synthetase-like 57 551 - -
Mtr5g1152 555 Pfam AMP-binding enzyme C-terminal domain 467 541 IPR025110 -
Mtr5g1152 555 Gene3D - 31 452 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1152 Mtr-Chr5 11472704 11476162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1152 10 551 Monolignol Biosynthesis Gene Families AT4G19010 59.232 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1152 K01904 - gmx:100804808 848.58