Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1146 ATGCTTAGTTTCTATGGTGACGCAATTGTGACTGAGGAGGGCTCGGATGACAACACAATCCCTCGCTATATCTTTGAATTTGTTAATTTCAATGATCTTATCAAACGTTGCGGGAAAGAGGTGTTGGCAGATGTAATTGGATTTATAATTGATGTGGATCCAATTGAGGAGAAAACAACCGTCAATGGGAAAGTCGACATGTTGTCACTTCATTTGGGGGATGGCAGTGGGAATGTCTTGAAGGTAACGCTATGGGATGACTATGCTCCGATGTTTAATCAAAAACTGATAGATCAAATGCATGCTACTCCTAAGCCAAATGTGGCAATTTTTACCTCCACTTTGGTAAAACAATACCAAGGTGAGCTTTATGTTTCGTCTTCAAGATCCACAACAATTTATATCAACATAGACACCCCTGAAGTTGCTGATCTAATTTTGTCGTCCAAGTGCGTCATTTAA 462 0.3983 MLSFYGDAIVTEEGSDDNTIPRYIFEFVNFNDLIKRCGKEVLADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGDGSGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGELYVSSSRSTTIYINIDTPEVADLILSSKCVI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1146 153 CDD RPA1_DBD_B_like 44 150 - -
Mtr5g1146 153 Pfam Replication protein A OB domain 35 136 IPR031657 -
Mtr5g1146 153 SUPERFAMILY Nucleic acid-binding proteins 25 145 IPR012340 -
Mtr5g1146 153 Gene3D - 19 150 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1146 16 145 Core DNA Replication Machinery Family AT5G45400 31.298 9.34e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1146 - K07466 mtr:MTR_4g070090 296.589