Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1132 ATGGCTGCTCAAACTTCAACCTCTCTCTTGAGATTGGAGCACATACCTAACAAAGGTAGAGGCCTTATTGCAACACAAGATCTCAAAGCTGGCCAAATAATCCTCACTGAATCCCCTCTTCTTCTCTATTCTGCTACACCTCTTTTCTCTCATACACCCTCCCCTTATTGTCACAACTGCTTCAGAACCTTACCACCTTCACAAACATTTCAATGTCCTTCTTGCTCAAACTACCTTTTCTGCAGCCAAAAATGCCTCTCCATTGCCCTCAATTCCTCTCATTCATCTTGGACATGTCAAACACTCTCTCATCTTCAAAACCCTACTTCACCATTATCAGAAAAACCTTGTGAACTTCAAGTTCAAGCTCGTTTGATTGTTGCTGCTTACAATCTTGCTATTCACACCCCTTCAAAACTTCAAACTTTACTTTCACTTCATGGTAATCCTAATGATCAAGATTCCATAGTTGATAATGCTAAGTTTCTTCATTCTCTTATCTCACCTTTTTGTTCACCCCACATGAATTTTTCAGCTGAACTAGCTGCTAAAATCATTGCCAAAGAAAGATTGAACTCTTTTTGCTTGATGGAGCCTTATTCCCAAAAGGGTCCTCAAAGATCCATTAAGGCTTATGGAATTTACCAAAAAGCTACTTTTTTTAACCATGGTTGTATCCCTAATGCATGCAGGTTTGATTATGTGGAAAGTGGTGAACCTGGTGATGAACATAATACTGATATTGTTATTAGGTTGATTAAGGATGTTGGTGTTGGAAGTGAGATTTGTATAAGCTATTTTAGGATTAATAAGGATTATTCAACAAGGAAAAAGATTTTAATGGAGGATTATGGTTTTACTTGTGAATGTGATAGGTGCAAGATTGAAGCAAGTTGGAATGATGGAGAGAACAAGTACAGTGATCTGCCACATGTGATTTTCTTATCTAAGTTTGTTTGTGATAAGGAGAATTGTGCAGGTACTATGGCTCCTCTGCCTCCAAAAGATGGTGAAAAATCTAACGTTCTTGAGTGTAATTTTTGTGGTAATTTGAAAGTTGACCTTGCTACTTAG 1074 0.378 MAAQTSTSLLRLEHIPNKGRGLIATQDLKAGQIILTESPLLLYSATPLFSHTPSPYCHNCFRTLPPSQTFQCPSCSNYLFCSQKCLSIALNSSHSSWTCQTLSHLQNPTSPLSEKPCELQVQARLIVAAYNLAIHTPSKLQTLLSLHGNPNDQDSIVDNAKFLHSLISPFCSPHMNFSAELAAKIIAKERLNSFCLMEPYSQKGPQRSIKAYGIYQKATFFNHGCIPNACRFDYVESGEPGDEHNTDIVIRLIKDVGVGSEICISYFRINKDYSTRKKILMEDYGFTCECDRCKIEASWNDGENKYSDLPHVIFLSKFVCDKENCAGTMAPLPPKDGEKSNVLECNFCGNLKVDLAT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1132 357 Pfam SET domain 19 266 IPR001214 GO:0005515
Mtr5g1132 357 CDD SET_SMYD 191 293 - -
Mtr5g1132 357 SMART set_7 8 273 IPR001214 GO:0005515
Mtr5g1132 357 SUPERFAMILY SET domain 9 289 IPR046341 -
Mtr5g1132 357 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 356 IPR044238 -
Mtr5g1132 357 Gene3D SET domain 21 294 IPR046341 -
Mtr5g1132 357 ProSiteProfiles SET domain profile. 5 267 IPR001214 GO:0005515
Mtr5g1132 357 Gene3D - 56 113 - -
Mtr5g1132 357 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 2 356 - -
Mtr5g1132 357 Gene3D - 114 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1132 Mtr-Chr5 11226301 11227722 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr5g1132 SET 5.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1132 - - cam:101515628 557.37