Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1129 ATGTTGCAATGCATAACATGTGCCAAGCAAACATCAGAAGATGGGGATGAGCAAGTTCAGCAGAGAGGCACACCAACTACCAGAGAAGCCCCCAAAAATCTGTCTGCGCAGATAAAGGATATTGTACTGAAGTTTAAAGGTGTTTGCACAAAAGGATCCACCAGTTCCTACAAAAGAGGACTGAGATCATCTGCTGCTAACTCTGAAGTCAATTCTGAGGTTCAATGCCCTTATATGGGAGGTGTGAGCTTAGGTTCAACTCCTCCTTGGGACTTGCCTGTCAATTTCACTGGTGGAAGATCTGATCAGAGGTTTATAGGGGGGACTAGTGGTAACCAAACTCCTACGGTGCAAGAGCCGGTTGTAGCGGAACCTGAGGCTGTGGTGGAGGAAAACAGAGAGTGGGTGGCTGAGGTGGAGCCGGGAGTTGATGTTACCTTTTTGTCTCTTCCTGATGGTGGAAATGATCTCAAGCGAATTCGCTTCAATCGCGAAATCTTTGATAAGTGGCAAGCTAGAGTATGGTGGGGTGAGAATTTTGACAGACTCAGGGAGCTTTATAATGTCCGGAGTTTCAATAGCCAAGCTCTTAGCACTGCTCTACCATCTGAGGATGAGCAAAGAGAAGCTTCTTACTCAATGCATGAAACTGGAAGTGGAAGCAATGTGGCTGCTTGGGAAAACAATGATCCAATGGTGGGGAATCAGTACTTTAATCCTTCAGGATTCACTATGGGTGAGGGAAGCAGTAGCAACCAAAACATGCATGCAGCATTAAGGTCTTCTTCTATGAATGAAATTTCCTTCAGCAATTCTAGTGACCCTGACTCAGAATGGATTGAGCAAGTTGAGCCTGGAATATTTGTCACAGTCAGGCAGTATCCTGATGGGAACAACGAGCTTAGACGTATCAAATTCAGCCGACAGAGGTTTGGAGATGCAGAGGCAAGGAAATGGTGGGATGAGAACAGAGATAGACTTCGAGAACAATACCTTCAGTGA 1002 0.4571 MLQCITCAKQTSEDGDEQVQQRGTPTTREAPKNLSAQIKDIVLKFKGVCTKGSTSSYKRGLRSSAANSEVNSEVQCPYMGGVSLGSTPPWDLPVNFTGGRSDQRFIGGTSGNQTPTVQEPVVAEPEAVVEENREWVAEVEPGVDVTFLSLPDGGNDLKRIRFNREIFDKWQARVWWGENFDRLRELYNVRSFNSQALSTALPSEDEQREASYSMHETGSGSNVAAWENNDPMVGNQYFNPSGFTMGEGSSSNQNMHAALRSSSMNEISFSNSSDPDSEWIEQVEPGIFVTVRQYPDGNNELRRIKFSRQRFGDAEARKWWDENRDRLREQYLQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1129 333 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 332 IPR044532 -
Mtr5g1129 333 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 332 - -
Mtr5g1129 333 Pfam Transcription factor regulating root and shoot growth via Pin3 133 187 IPR013591 -
Mtr5g1129 333 Pfam Transcription factor regulating root and shoot growth via Pin3 277 331 IPR013591 -
Mtr5g1129 333 ProSiteProfiles BRX domain profile. 277 332 IPR013591 -
Mtr5g1129 333 ProSiteProfiles BRX domain profile. 133 188 IPR013591 -
Mtr5g1129 333 MobiDBLite consensus disorder prediction 198 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1129 Mtr-Chr5 11205730 11211832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1129 1 332 Major Intrinsic Protein MIP AT1G31880 43.909 1.36e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1129 - - mtr:MTR_5g026970 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1129 5 11205730 11211832 Mtr5g1129 5 11205730 11211832 ECH