Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1108 ATGTCTCTTCTCAGCAGATTCTTCTACAAAAGACCCCCAGATGGTTTACTCGAATTCATTGACAGAGTTTACGTTTTCGATTCATGTTTTTCTACTGAAGCATTACCAGATGGAATGTACCAGCTATATCTTCACGAAATCGTGACTGAATTACATGAAGAGTTTCCAGAATCATCCTTTCTAGCGTTCAATTTTCGCGACGGCGAAAAGCGAAGCAATTTCGCTGAAATAATGTGTGATTATGATGTTATTGTTATGGATTATCCAAAAAACTATGAGGGTTGTCCTCTTTTGCCACTTTCACTTATTCAGCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTTGCTTGGTAATCATCAAAATGTGATTTTGTTTCATTGTGAAAGAGGGGGTTGGCCACTTTTGGCTTTTTTGTTGGCAAGTTTGTTGATTTTTAGAAGGGTTCATAGTGGTGAACGTAGGACACTTGAAATGGTTCATAGAGAAGCACCTAAGGGTTTGTTGCAGTTGTTGTCACCTTTGAATCCACAGCCTTCACAGCTTCGGTATATTCAATATGTTGCGAGGAGGAACATTGCGCCGGAGTGGCCTCCTCCTGAGAGAGCATTGTCTTTGGATTGTGTTATACTTAGGGGAATTCCTAGCTTTGATTCATCTAATGGATGTAGGCCGATGTTTAGGATTTTTGGCAGGAATTTGCTTAGTAGAGGCGGACTTTCTACTCAGATGATTTATAACATGCATAAGAAGAAGCATTTGAGGCATTATAGTCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTCTGGAGTGTGTCCATTTGGATTTGGATCCGGAAAGGGAAGTGATGATGTTTCGTGTGATGTTCAATACGGCGTTTATTCGATCAAATATACTGATGCTGAACACTGAAAACTTGGATATTCTTTGGGACTCGAAGGAGCGGTATCCGAAAGGCTTCAGGGCTGAGGTTTTATTTGGGGAGGTTGAAAACATAAGTCCTCAGAGAGCTCCGACGGAAACAGCCATTTTGAATGGTGAGGAGAAAGGTGGATTACCTATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGAGTGGAATGGGTTGACAGTGGTGATGCTGCGGCAGTGTGGCTGCTTAGACAGCTTACTGTCTTAAATGAAGCCAAAGAGTTTTCGAGGATGCAAGGTAAAGGAAGTTGGTTTTCGTCACCAGCTGACTCTGAAGAAGAAAATAATGGATCAAGTATTGCTGATAGTTCAGATGAAGCCTTTGATGTTACTCCCAAATCTTCTGCTGTTCCTTCAAAATTATTGACATCTGACACCCCTGATTTGGATCATTTAGCTTTTGAAAACAATGGTGGAAATTGTGTAAATCTCACTTCTAGAATGCCTGATCAGTTATTGACTGATAATGTTTCACCACCTCATCATACCGGTGGTTCCCCTCTAGGTTGTAACACTGATAATGCTTCTGGTCCACCTCCACCCGCTCCCCCGCCCATGACCAGCAATGCTAGCAGTGCTTCAACATTTCATTCATCTCCTCTACCAGGACCTGTCCATACAAGTTCAGTCCCATTACCTCCACCCCCACCACCTCCTCCAGGATTTGCTCCCATAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTACATTTCCCACACGAATAGGTTTAACCCCGCCGCCACCACCACCTCCTCCTCCTCCAGTTCCATCACAGACAGGTTCAGCTCCGCTACCTCCACCACCTCCTCCAGTTCCGCTGCAAACAGGTTCAGCTCCACCACCTCCACCACCTCCTCCAGTTTCTCTGCGAACAGTTTCAGCCCCTCCACCTCCACCACCTCCTCCAGTTCCTCTGCGAACAGGTTCAGCCCCGCCACCTCCACCACCTCCTCCTCCAGGTTCTACACGAACAGGATCAGTCCCACCACCTCCACCCCCACCGCCTCCAGGCTCTACACAAACAACATCAGCCCCACCACCTCCACCACCACCGCCAGGTTCTGCACGAACTGGTTCAGCCCCACCACCTCCACCACCACCACCACCTCCAGGTTCTACACGAACAGGTACAGCCCCACCACCTCCGCCACCACCTCCAGGTTCTACACGAACAGGTTCAGCCCCACCACCTCCTCCAGGTTCTACACGAACAGGTTCTGCCCCACCACCTCCGCCACCTCCTCCAGGTTCTACACGAACAGGATCTGCCCCACCACCTCCGCCACCTCCTCCAGGTTCTACACGAACAGGATTAGGCCCACCACCTCCACCACCTCCTCCAGGTCCTCCACGAACAGGTTCAGCCCCACCACCTCCGCCTCCTCCAGGTCCTCCTCGACCAGGTTCAGCCCCACCACCTCCGCCTCCTCCAGGTCCTCCTCGACCAGGTTCAGCCCCACCACCTCCACCTCCTCCAGGATCTGGACGAACAGGTTCAGCTCCGCCAGCACCTCAGCCTCCTAATGCTCCTCCTCCACCACCTGGTCGTGGCTCATTGCCGGCACCTCCACCTATTGCAGGCAGAGCCCCTGGCGTGCCTCCACCACCAGGCAAAGCTTCTCTAGCAACAACAAATGTGGGAAGAGGTCGTGGTACTGGTACGACTGGTATTGCTGTTAAAAAAACTTTGTTAAAGCCTCTGCATTGGGTGAAAGTTTCTCGAGCAGTGCAAGGGAGTTTATGGGCTGATTCACAGAAACAAGACAATAGTTCAAGGGCCCCTGACATAGACATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTATTTCTGACGGAAATAGTACTAAAGGTGGAGTTCGGCGTGGTCCTAATATTAATAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAACGCAGTTTTGGCATTGGATTCTTGTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATACTGAAGAACTATACTGGGAACAAGGATATGCTTGGGAAGTGTGAGCAGTTTTTCATGGAGCTGATGAAGGTTCCACGAATAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGGTCAGGTGAGCGATTTAAGGAAAAATTTGAATACAATCAACGATGCAACCAGAGAGGTCAAAGAATCGGTAAAATTGCGTCAAATAATGCAAACTATTCTTACATTGGGCAATGCTTTGAATCAGGGAACAGCACGAGGTTCAGCAGTAGGATTCAAATTGGACAGCCTTCTCAAATTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAAAAAATGCCAGAATTGATAGATTTTGACAAGGATCTTGTCCATTTGGAAGCTGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTTCTATATCTTCAGGATTTCGCAAGGTGTTGAAGAATTTTCTTGACTTTGCCGAAGCTGATGTGAGGTCACTTATATCATTGTATGCCGATGTGGGAAGAAATGCCGATTCTTTGTCCAAATACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACACAAATACTTGTTGTCTTTGTAAAGACCTTCAACAAGTCAAGGGAGGAGAATGAAAGGCTAGCAGATGCTGAGAAAAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGACAGCAAATAACACACATTCTAGAAAAGACGTGGTTCGATAG 3888 0.4609 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAFNFRDGEKRSNFAEIMCDYDVIVMDYPKNYEGCPLLPLSLIQHFLRVCESWLLLGNHQNVILFHCERGGWPLLAFLLASLLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPQPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNLLSRGGLSTQMIYNMHKKKHLRHYSQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTETAILNGEEKGGLPIEAFSRVQELFSGVEWVDSGDAAAVWLLRQLTVLNEAKEFSRMQGKGSWFSSPADSEEENNGSSIADSSDEAFDVTPKSSAVPSKLLTSDTPDLDHLAFENNGGNCVNLTSRMPDQLLTDNVSPPHHTGGSPLGCNTDNASGPPPPAPPPMTSNASSASTFHSSPLPGPVHTSSVPLPPPPPPPPGFAPIGSAPPPPPPPPTFPTRIGLTPPPPPPPPPPVPSQTGSAPLPPPPPPVPLQTGSAPPPPPPPPVSLRTVSAPPPPPPPPVPLRTGSAPPPPPPPPPGSTRTGSVPPPPPPPPPGSTQTTSAPPPPPPPPGSARTGSAPPPPPPPPPPGSTRTGTAPPPPPPPPGSTRTGSAPPPPPGSTRTGSAPPPPPPPPGSTRTGSAPPPPPPPPGSTRTGLGPPPPPPPPGPPRTGSAPPPPPPPGPPRPGSAPPPPPPPGPPRPGSAPPPPPPPGSGRTGSAPPAPQPPNAPPPPPGRGSLPAPPPIAGRAPGVPPPPGKASLATTNVGRGRGTGTTGIAVKKTLLKPLHWVKVSRAVQGSLWADSQKQDNSSRAPDIDISELETLFSAASISDGNSTKGGVRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSCVLDIDQVENLIKFCPTKEEMEILKNYTGNKDMLGKCEQFFMELMKVPRIESKLRVFAFKITFSGQVSDLRKNLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGSISSGFRKVLKNFLDFAEADVRSLISLYADVGRNADSLSKYFGEDPARCPFEQVTQILVVFVKTFNKSREENERLADAEKKKLEKEAMKEKTANNTHSRKDVVR* 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1108 1295 Coils Coil 1163 1183 - -
Mtr5g1108 1295 SUPERFAMILY Formin homology 2 domain (FH2 domain) 957 1286 - -
Mtr5g1108 1295 MobiDBLite consensus disorder prediction 1262 1295 - -
Mtr5g1108 1295 ProSiteProfiles Formin homology-2 (FH2) domain profile. 882 1282 IPR015425 -
Mtr5g1108 1295 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Mtr5g1108 1295 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Mtr5g1108 1295 Gene3D - 201 341 - -
Mtr5g1108 1295 Gene3D Formin, FH2 domain 884 1267 IPR042201 -
Mtr5g1108 1295 Pfam Formin Homology 2 Domain 888 1256 IPR015425 -
Mtr5g1108 1295 MobiDBLite consensus disorder prediction 407 449 - -
Mtr5g1108 1295 MobiDBLite consensus disorder prediction 515 532 - -
Mtr5g1108 1295 MobiDBLite consensus disorder prediction 478 881 - -
Mtr5g1108 1295 SMART it6_source 552 1292 IPR015425 -
Mtr5g1108 1295 Gene3D Protein tyrosine phosphatase superfamily 18 200 IPR029021 -
Mtr5g1108 1295 MobiDBLite consensus disorder prediction 478 500 - -
Mtr5g1108 1295 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Mtr5g1108 1295 PANTHER FORMIN-J 799 1288 - -
Mtr5g1108 1295 PANTHER FORMIN-J 1 723 - -
Mtr5g1108 1295 SMART PTEN_C2_2 198 1010 IPR014020 -
Mtr5g1108 1295 MobiDBLite consensus disorder prediction 533 865 - -
Mtr5g1108 1295 Coils Coil 1257 1286 - -
Mtr5g1108 1295 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1108 Mtr-Chr5 11017872 11026192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1108 1 440 FH2 protein (formin) Gene Family AT1G31810 76.417 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1108 - - mtr:MTR_5g026645 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1108 5 11017872 11026192 Mtr5g1108 5 11017872 11026192 ECH