Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1099 ATGGACATTTGTCTTATCAAAGGCCAATGGCTGTGGCTTCTGTATGTTTTGTTGATACATATTGTAATTAATAACATAGAAGCGATCACTCCTGATGGTGAGGCACTTATCAACTTCAGGACAACAATTGGTAGCTCTGATGGTATCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTGACACATCTGATTCTATCACACCATAAGTTAATTGGGCCTTTATCACCTGACCTGGGGAAGTTAGACCGTCTGAAAGTTCTTGCTCTTCATAACAACAACCTCTATGACAAAATTCCACCAGAATTGGGAAATTGCACCGAATTGCAGTCAATTTTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAAATAGGAAATCTCTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTTGGTGGGAATATTCCAGCGTCAATTGGAAAGTTGTATAATCTAAAAAACTTCAATGTATCAACCAATTTTCTGGTTGGACCAATACCTTCTGACGGTGTCCTTGCCCACTTTACTGGAAGCTCGTTTGTTGGAAACCGTGGTTTGTGTGGCGTGCAAATCGATTCAACATGTAAAGATGATGGTTCGCCTGGGAATAGTTCTTCAGACCAAACTCAAAATGGAAAGAAGAAATATTCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTGGGCGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGCTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAGAATAAGTCTTGCAGTGGATGTTGGTCCAGGTGCCTCGATAGTGATGTTTCATGGAGACCTACCATATTCTTCGAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCGTTGAAAAAGATCGTAAAGTTGAATGAGGGATTTGATCGTTTTTTTGAGAGGGAGCTTGCAATTCTTGGAAGCATCAAACACCGTTATTTAGTTAACTTGCGTGGATATTGTAATTCACCTACATCAAAGTTGTTAATATATGACTACCTACCTGGCGGTAGTCTTGATGAAGTTCTTCATGAAAAATCTGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCACGATTGTTCCCCTAGGATCATACACCGTGACATTAAATCGAGCAACATTTTGCTTGATGGAAAATTGGATGCTAGAGTTTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCCGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGAAGAGCAACTGAGAAGACCGATGTTTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACAGATGCATCCTTCATTGAAAAGGGTCTAAATGTTGTTGGTTGGTTGAATTTCCTTATTACTGAAAATAGGCCAAGGGAAATTGTCGATCCACTATGCGACGGGGTGCAGGTGGAGAGCCTTGATGCCTTGCTCTCGATGGCTATTCAGTGTGTTTCCTCAAATCCAGAGGATCGACCCACTATGCACCGAGTGGTCCAGTTGCTTGAATCGGAGGTAGTAACTCCATGCCCAAGTGACTTCTATGATTCGAACTCTGACTAG 1776 0.4127 MDICLIKGQWLWLLYVLLIHIVINNIEAITPDGEALINFRTTIGSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLILSHHKLIGPLSPDLGKLDRLKVLALHNNNLYDKIPPELGNCTELQSIFLQGNYLSGMIPSEIGNLSQLQNLDISSNSLGGNIPASIGKLYNLKNFNVSTNFLVGPIPSDGVLAHFTGSSFVGNRGLCGVQIDSTCKDDGSPGNSSSDQTQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAVDVGPGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKKIVKLNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNVVGWLNFLITENRPREIVDPLCDGVQVESLDALLSMAIQCVSSNPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1099 591 ProSiteProfiles Protein kinase domain profile. 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1099 591 Gene3D Transferase(Phosphotransferase) domain 1 382 579 - -
Mtr5g1099 591 SUPERFAMILY Protein kinase-like (PK-like) 289 573 IPR011009 -
Mtr5g1099 591 SUPERFAMILY L domain-like 31 194 - -
Mtr5g1099 591 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 591 IPR031071 GO:0004672|GO:0005524|GO:0030244
Mtr5g1099 591 Pfam Protein kinase domain 308 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1099 591 SMART serkin_6 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1099 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Mtr5g1099 591 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Mtr5g1099 591 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Mtr5g1099 591 PANTHER RECEPTOR-LIKE PROTEIN 55 3 591 - -
Mtr5g1099 591 Gene3D Phosphorylase Kinase; domain 1 283 381 - -
Mtr5g1099 591 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1099 Mtr-Chr5 10921925 10932243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1099 1 582 Receptor kinase-like Gene Family AT2G35620 75.086 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mtr5g1099 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1099 - - gmx:100819230 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1099 5 10921925 10932243 Mtr5g1099 5 10921925 10932243 ECH