Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1085 ATGTCACATATTCTCAATGATATTGCATCCCAAGAATATGAAAAATTTGAAGTAAAGTTCATTAAGAAAAGTGTTGTAAAAGCTCTCAATCATTTTCCAAAGCCATTTTCAGTGATTAATCTCTCAAATCTTGATCTACTTTCTGGTCGTTTTCCAGTTACATACTTGTATTTCTACAAAAAACCAAAACTAGGTAACTTCAAATCTTTTGTTAACAATCTTAAAACTTCTCTAGCACAAATACTTAATCATTACTATCCCTTTGCTGGCCACATTGTTCAAAATCATAAAACCGACGAACCTCAAATCATTTGTGACAACAATGGTTCATTAGTCATTGAAGCTCAAGTAAATGTTCCACTAAGAAATTTAGATTTTTATAATCTCAATGAAACTCTTGAAGAAAAGATAGTCTCAATTGAACTAGATTTCCCTTTACAAATTCAGGTAACAGAATTTACTTGTGGTGGAATTTCAATAGCATTTACTTTTGATCATGCATTAGGTGATGCAACTTCATTTGGTAAATTCATTTCATCTTGGTGTGAAATAGCGCAAAATAAACCGTTATCATGCATACCGAACCATAAAAGAAACCTTTGCGCGCGTTCGCCCCTCATATACCAACCTTATTTGGATCAAATTTTTATCAAATGCACCATGGAAGAGATACAAAATATGAAAATGAGTAAAAATATTTCACTTAAACGTCTTTATCATATCGATGCTTCGAGTATTAATATGCTGCAGAGGCTTGCTTCTGTTAATGGTATCAAGAGAACAAAGATTGAAGCTTTCTCTGCCTATGTATGGAAGAAAATGATAAACACAGTTGATCAAAAACTTTATAAAAAATGCAAGATGGGTTGGTTAGTAGATGGAAGAGAAAGAATGAGTGTAAGCAAAAATTCAATGTCGAATTACATCGGTAATGTATTGTCTTTGGCTTTCGGTGAGGCAAGGATTCAAGAATTGAAGGAAGGTTCATTATCAGACATTGGTGAAATAGTTCATGATGCAATTTCAAAGGTTAGTAATGAGGAACATTATTTGGATTTGATTGATTGGATTGAGTTTCATAGGCCAGGTTTGATGCTTGCAAAGGCGGTGTTAGGACAGGATGATGGACCTGTCTTGGTGGTTTCTTCAGGACAAAGGTTTCCTGTTAGTGAAGTTGATTTGGGATTTGGAAGTCCATTGTTAGGGACAGTGTATACCTCAATTGAAAGGGTTGGTGTTGGTTATATGAATCAAAGGCAAAGTGGCAAGGGTGATGGTTCATGGACTGTTTCAGCTATATTGTGGCCTGAATTAGTAGATGCTTTGAAGGATGATCCAATTTTTCAGCCCATGACTGCTTCTTATCTACAGCTTTAG 1377 0.3479 MSHILNDIASQEYEKFEVKFIKKSVVKALNHFPKPFSVINLSNLDLLSGRFPVTYLYFYKKPKLGNFKSFVNNLKTSLAQILNHYYPFAGHIVQNHKTDEPQIICDNNGSLVIEAQVNVPLRNLDFYNLNETLEEKIVSIELDFPLQIQVTEFTCGGISIAFTFDHALGDATSFGKFISSWCEIAQNKPLSCIPNHKRNLCARSPLIYQPYLDQIFIKCTMEEIQNMKMSKNISLKRLYHIDASSINMLQRLASVNGIKRTKIEAFSAYVWKKMINTVDQKLYKKCKMGWLVDGRERMSVSKNSMSNYIGNVLSLAFGEARIQELKEGSLSDIGEIVHDAISKVSNEEHYLDLIDWIEFHRPGLMLAKAVLGQDDGPVLVVSSGQRFPVSEVDLGFGSPLLGTVYTSIERVGVGYMNQRQSGKGDGSWTVSAILWPELVDALKDDPIFQPMTASYLQL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1085 458 Gene3D - 218 444 IPR023213 -
Mtr5g1085 458 Gene3D - 15 208 IPR023213 -
Mtr5g1085 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 39 454 - -
Mtr5g1085 458 Pfam Transferase family 17 445 - -
Mtr5g1085 458 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 39 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1085 Mtr-Chr5 10842709 10844448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1085 42 401 Monolignol Biosynthesis Gene Families AT5G48930 25.199 1.06e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1085 - - mtr:MTR_5g026320 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1085 5 10842709 10844448 Mtr5g1085 5 10842709 10844448 ECH