Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1081 ATGAAGAACACAAGATTAAGCCAATGGTTAAAGTTAAATATTCTGGTGTTTGTACTGGTATTGCTGAAGGTAGAAGCTGGTTATGTACCAATCACTTTACTCAAGAGCGCGGTATCAAAAGGAGCCGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTAGATAAAGGATTTGGAACAGGAATTAACAGTTGGTTAGTTCAATTTGAGGGAGGGGGATGGTGCAACAATGTCACTACTTGCCTTTCTCGCAAGACGTATCGGTTAGGTTCATCTAAGCAAATGGCTAATCAAATTGCCTTTTCAGGAATTTTAAATAACAGGAGACAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGACGGTTCGTCTTTTACCGGTGATGTCGAAGCAGTCAATCCAGTAACTAAGTTGCATTTCAGAGGAGCAAGAATTTTTAATGCTGTCATGGAGGATTTGCTAGCAAAAGGAATGAAAAATGCGAAAAATGCTATTATCTCAGGATGTTCAGCTGGTGGATTGGCTTCAATTCTGCATTGTGATCGCTTTCGTGCTCTTTTACCGAGAGGAGCTAAAGTGAAATGCCTCTCAGATGCCGGTTACTTTATCAACGCAAGGGATGTATCTGGAGCACATCATGTTGAACAGTACTTCACTCAAGTTGTTACAACACATGGCTCTGCAAAGAATTTGCCTAGATCATGCACTTCAAGACTCAGTCCAAGGCTGTGCTTTTTCCCTCAATATGTTATATCACAAATCGCTACACCAATCTTCCTTGTGAATGCGGCATACGACTCATGGCAGATTAAGAACATTTTAGCACCGGGAGCTGCTGATCCTCGTGGACACTGGCACAGCTGCAAGTTAGATATAAACAACTGCTCTTCTAATCAACTAGATCTAATGCAAGGCTTTAGAACACAATTTTTAAGGGCATTGACTGCTGTAGGAAACTCTACATCCAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAAGGAACATGGTTTAGTAGTGACTCTCCATCGTTGGCCAAGACAAGCATTGCAAAAGCCGTAGCAGACTGGTTTTATGAAAGAAAGCTATTCCATAAGATAGATTGTCCTTACCCTTGCAATCCGAGTTAA 1164 0.4089 MKNTRLSQWLKLNILVFVLVLLKVEAGYVPITLLKSAVSKGAVCLDGSPPAYHLDKGFGTGINSWLVQFEGGGWCNNVTTCLSRKTYRLGSSKQMANQIAFSGILNNRRQFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFNAVMEDLLAKGMKNAKNAIISGCSAGGLASILHCDRFRALLPRGAKVKCLSDAGYFINARDVSGAHHVEQYFTQVVTTHGSAKNLPRSCTSRLSPRLCFFPQYVISQIATPIFLVNAAYDSWQIKNILAPGAADPRGHWHSCKLDINNCSSNQLDLMQGFRTQFLRALTAVGNSTSKGMFIDSCYAHCQTEMQGTWFSSDSPSLAKTSIAKAVADWFYERKLFHKIDCPYPCNPS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1081 387 Pfam Pectinacetylesterase 24 374 IPR004963 GO:0016787
Mtr5g1081 387 PANTHER PECTIN ACETYLESTERASE 3 386 - -
Mtr5g1081 387 PANTHER NOTUM-RELATED 3 386 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1081 Mtr-Chr5 10817913 10821124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1081 5 387 Carbohydrate Esterase AT4G19420 63.397 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1081 K19882 - gmx:100818146 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1081 5 10817913 10821124 Mtr5g1081 5 10817913 10821124 ECH
Mtr5g1081 5 10817913 10821124 Mtr8g2262 8 32857127 32860665 PCT
Mtr8g2261 8 32845676 32850846 Mtr5g1081 5 10817913 10821124 PCT