Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1076 ATGTCGTTTGGCACAAACAAAACCGTGGCAGTGGCTGCATTAGGAAACCAAACAGATCATTTGGCATTGCACAAATTTAAAGAATCAATATCGAGTGACCCAAATAAAGCTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGCATGGAATCACATGCAAACCCATGCATGAAAGAGTTACAAAGTTGAACTTAGAAGGATATCATTTACATGGATCTTTATCACCCCATGTTGGCAATCTCACTTTTCTCACAAATCTAAACATTGGAAACAATGACTTCCTTGGAGAAATCCCAGAAGAGTTGGGTCGGTTGCTACAATTGCAACAACTTGATCTCATCAATAACTCGTTCGCAGGAGAAATTCCTTCAAACTTGACATATTGCTCCAATCTCAAAGGCTTAAATGTGGGAGGGAACAATGTGATTGGCAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTCAACTAATAAATGTTTGGGGAAACAATTTAACTGGTGGATTTCCTTCATTCATAGGGAATCTTTCATCCTTAATAGGGATTGCGGTTACATATAACAACTTAAAGGGAGAGATTCCACAAGAAATATGTAATCTCAAAAACATTAGAAGGTTACATGTGGGTGAGAACAATTTGTCTGGTATGTTTCCTTCTTGTCTTTATAATATCTCATCACTAACTCAACTCTCACTAACCGAAAATAAATTTATTGGCTCTCTTCCATCCAACTTGTTCAACACTCTCCCCAATCTCAACATGTTCCAAATTGGAAAAAATCAGTTCTTTGGTTCAATGCCTATTTCCATTGTAAATGCTTCTTCCCTACAATTACTTGACTTAGCTCAAAACTATTTGGTGGGGCAAGTTCCAAGTCTAGAGAAGTTACAAGATCTTTACTGGCTAAATTTGGAAGACAACTATTTCGGTAACAATTCAACTATCGATTTAGAGTTTTTAAAGTATTTGACAAATTGTAGTAAACTAGAAGTGGTTTCTATATGTAATAATAAGTTTGGAGGTAGTTTGCCAAATTCCATTGGCAGTTTATCCACCCAACTTACAGAACTATGTCTTGGTGGAAATTTGATATCAGGAAAAATTCCCGTGGAAATAGGAAATCTAGTTGAGTTAATACTCTTGGCCATCGATTTTAACCACTTTGAAGGAATAATTCCAACTTCTTTTGGGAAGTTCCAAAAGATGCAATATTTAGCTTTGAGTGGAAACAAGTTGTCAGGATATATACCACCCTTCATAGGCAATCTCAGTCAATTGTTTAAATTGGATTTATATCGTAATATGTTCCAAGGAAATATTCCTCCAAGCATAGAAAATTGTCAAAAGTTACAATACCTAGATCTTTCTCATAATAAGCTTAGTGGAACCATACCTTCAGAGATTTTTCATATTTTTTCTTTATCAAACTTATTGAACTTATCACATAACTTTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTTTACTAAAAAATATTGATTGGCTAGATGTCTCTGAGAATCATCTATCTGGTGATATTCCTACAACAATTGGTGATTGCACAGCCTTAGAATACCTTCACCTGCAAGGGAACTCCTTCAATGGAACAATACCATCCTCTTTGGCTTCTCTCGAAGGTCTTCAACATTTAGACCTTTCAAGAAATCGATTGTCTGGGTCAATTCCTGATGTTATGCAAAATATCTCTGTTTTAGAATATTTGAATGTTTCTTTTAACATGTTGGAAGGTGAGGTACCAAAAAATGGTGTATTTGGAAATGTAACCAAAGTAGAATTGATTGGAAACAATAAGCTTTGTGGAGGTATTTTGCTGCTGCATTTACCACCATGCCCTATCAAGGGTAGGAAAGACACAAAACACCATAAATTCATGTTGGTCGCAGTGATAGTTAGTGTTGTTTTTTTTCTTCTCATACTTTCATTTATTATAACTATCTATTGGGTAAGAAAAAGAAATAACAAAAGATCTATCGATTCACCTACAATTGATCAACTAGCTACAGTTTCATACCAAGACTTACATCATGGAACAAACGGTTTCTCAAGTAGAAACTTGATCGGATCAGGAAGTTTTGGTTCAGTGTACAAAGGAAATCTTGTGTCCGAAAATAATGCTGTTGCCGTAAAAGTCCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGTACTCAAGAACATTAGACACCGAAATTTAGTTAAGATTTTAACGTGTTGTTCTAGTATAGATTACAAAGTTCAGGAGTTTAAAGCTCTAGTTTTTTATTACATAAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGTTTTTAAATGAAGAGCATCCAAAAACGTTAGACCTTGGCCACAGATTAAACATCATTATCGATGTTGCTTCAACATTACATTATCTTCACCAAGAATGTGAGCAATTAGTCATTCACTGTGATCTCAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGACTGATTTTGGCATAGCAAAACTTGTCTCAGCCACTAGTGGCAATACTAGTACAATTGGAATAAAAGGAACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATATGGTGATATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACTGGTAGAAGACCCACTGATGAAGTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATATCGTTTCCTGATAATCTTATAAATATCTTGGACCCGCATCTTCTATCAAGAGATGCAGTAGAAGATGGAAACAATGAGAATCTTATTCCAACTGTAAAAGAGTGTTTAGTTTCACTTTTTAGGATTGGACTTATTTGTACAATTGAATCACCAAAAGAAAGAATGAATACTGTGGATGTCACTAGAGAGCTCAACATAATCAGAAAGGCCTTTCTTGCTGGTTTTCGCACTCATAATTAG 2994 0.3567 MSFGTNKTVAVAALGNQTDHLALHKFKESISSDPNKALESWNSSIHFCKWHGITCKPMHERVTKLNLEGYHLHGSLSPHVGNLTFLTNLNIGNNDFLGEIPEELGRLLQLQQLDLINNSFAGEIPSNLTYCSNLKGLNVGGNNVIGKIPIEIGSLKKLQLINVWGNNLTGGFPSFIGNLSSLIGIAVTYNNLKGEIPQEICNLKNIRRLHVGENNLSGMFPSCLYNISSLTQLSLTENKFIGSLPSNLFNTLPNLNMFQIGKNQFFGSMPISIVNASSLQLLDLAQNYLVGQVPSLEKLQDLYWLNLEDNYFGNNSTIDLEFLKYLTNCSKLEVVSICNNKFGGSLPNSIGSLSTQLTELCLGGNLISGKIPVEIGNLVELILLAIDFNHFEGIIPTSFGKFQKMQYLALSGNKLSGYIPPFIGNLSQLFKLDLYRNMFQGNIPPSIENCQKLQYLDLSHNKLSGTIPSEIFHIFSLSNLLNLSHNFLSGSLPREVGLLKNIDWLDVSENHLSGDIPTTIGDCTALEYLHLQGNSFNGTIPSSLASLEGLQHLDLSRNRLSGSIPDVMQNISVLEYLNVSFNMLEGEVPKNGVFGNVTKVELIGNNKLCGGILLLHLPPCPIKGRKDTKHHKFMLVAVIVSVVFFLLILSFIITIYWVRKRNNKRSIDSPTIDQLATVSYQDLHHGTNGFSSRNLIGSGSFGSVYKGNLVSENNAVAVKVLNLQKKGAHKSFIVECNVLKNIRHRNLVKILTCCSSIDYKVQEFKALVFYYIKNGSLEQWLHPEFLNEEHPKTLDLGHRLNIIIDVASTLHYLHQECEQLVIHCDLKPSNVLLDDDMVAHVTDFGIAKLVSATSGNTSTIGIKGTVGYAPPEYGMGSEVSTYGDMYSFGILMLEMLTGRRPTDEVFEDGQNLHNFVAISFPDNLINILDPHLLSRDAVEDGNNENLIPTVKECLVSLFRIGLICTIESPKERMNTVDVTRELNIIRKAFLAGFRTHN* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1076 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Mtr5g1076 997 ProSiteProfiles Leucine-rich repeat profile. 452 474 IPR001611 GO:0005515
Mtr5g1076 997 Pfam Protein kinase domain 692 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1076 997 PANTHER LRR RECEPTOR-LIKE KINASE 10 992 - -
Mtr5g1076 997 Pfam Leucine Rich Repeat 452 470 IPR001611 GO:0005515
Mtr5g1076 997 Pfam Leucine rich repeat 384 438 IPR001611 GO:0005515
Mtr5g1076 997 Pfam Leucine rich repeat 525 584 IPR001611 GO:0005515
Mtr5g1076 997 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Mtr5g1076 997 SMART serkin_6 690 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1076 997 Pfam Leucine rich repeat N-terminal domain 17 55 IPR013210 -
Mtr5g1076 997 Gene3D Ribonuclease Inhibitor 14 185 IPR032675 -
Mtr5g1076 997 SUPERFAMILY Protein kinase-like (PK-like) 665 982 IPR011009 -
Mtr5g1076 997 PRINTS Leucine-rich repeat signature 453 466 - -
Mtr5g1076 997 PRINTS Leucine-rich repeat signature 547 560 - -
Mtr5g1076 997 Gene3D Phosphorylase Kinase; domain 1 671 771 - -
Mtr5g1076 997 PANTHER OS04G0122200 PROTEIN 10 992 - -
Mtr5g1076 997 SUPERFAMILY L domain-like 17 312 - -
Mtr5g1076 997 SUPERFAMILY L domain-like 327 610 - -
Mtr5g1076 997 ProSiteProfiles Protein kinase domain profile. 690 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1076 997 SMART LRR_typ_2 547 570 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 107 131 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 499 523 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 378 401 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 227 251 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 203 226 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 451 474 IPR003591 -
Mtr5g1076 997 SMART LRR_typ_2 426 450 IPR003591 -
Mtr5g1076 997 Gene3D Ribonuclease Inhibitor 186 326 IPR032675 -
Mtr5g1076 997 Gene3D Ribonuclease Inhibitor 327 620 IPR032675 -
Mtr5g1076 997 Gene3D Transferase(Phosphotransferase) domain 1 772 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1076 Mtr-Chr5 10768405 10771954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1076 16 995 Receptor kinase-like Gene Family AT3G47570 46.432 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1076 Pkinase 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1076 - - mtr:MTR_5g025930 1287.71