Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1075 ATGAAGTCTTTTTCTTTGGTGTCATCTACACTTTTATACCTTCATCTTCTTTTTCTTTTTACCTTGAATTTAATGCAGTTTGGCACAAACAAAATGGTGGCAGTGGCTCAATTAGGAAACCAATCAGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATCAAGTGATCCATATAAAGCTCTTGAGTCTTGGAATTCTTCCATCCACTTCTGCAAGTGGTATGGAATCACATGCAACCCCATGCATCAAAGAGTTATAGAGTTGGACCTAGGAAGTTATCGCTTACAAGGACGTTTATCCCCCCATGTTGGCAATCTCACTTTTCTGATAAAACTCAAACTTGAAAACAACACATTCTATGGAGAAATTCCACAAGAGTTGGGTCAGTTGCTACAATTGCAACAACTTTTTCTTACTAATAACTCTTTTGCAGGTGAAATTCCTACAAACTTGACATATTGCTCAAATCTGAAAGTCATAACTTTGGCAGGGAACAAGTTGATTGGCAAAATACCAATTGAAATTGGCTATTTGAAAAAACTTCAATCATTGAGTGTTTGGAATAACAATTTAACTGGAGGAATCTCTTCATCCATAGGGAATCTTTCAAGTTTAATGCTTTTTTCGGTTCCTTCAAACAACTTAGAAGGGGATATTCCACAAGAAATATGTCGTCTAAAAAATTTGAGAGGTTTATATATGGGTGTAAACTATTTGTCTGGTATGGTTCCTTCTTGTATTTACAATATGTCATTACTGACTGAGCTTTCACTAGTCATGAATAACTTCAATGGCTCTCTTCCATTTAACATGTTCCACAACCTACCCAATCTAATTATTTTTGAATTTGGAGTAAATCAATTCACAGGTCCAATCCCTATTTCCATTGCAAATGCTTCTGCCTTACAATCACTTGATTTAGGTGATCAAAACAATTTGGTTGGACAAGTTCCAAATCTTGGGAAGTTACAGGATCTTCAAAGATTAAATTTGCAGTCTAACAATTTAGGTAACAATTCAGCCATAGATTTAATGTTTTTAAGATATTTGACAAATTGTACTAAATTAAAATTGTTTTCGATAGCTGGTAATAATTTCGGAGGTAATTTTCCAAATTCCATAGGCAATTTATCAGCTGAACTTAAACAACTATATATAGGGGAAAATCAGATATCAGGAAAAATTCCTGCAGAATTAGGACATCTAGTTGGCTTAATTCTCTTGGCCATGAATTTTAACCATTTTGAAGGAATTATTCCAACTACTTTTGGGAAGTTCCAAAAGATGCAGGTGTTAATTTTGAGTGGAAACAAGTTGTCAGGAGATATACCACCCTTTATAGGAAATCTTAGTCAATTGTTTGATTTGGAATTAAATTTTAATATGTTTCAAGGGAATATTCCTCCTACCATAGGAAATTGTCAAAATTTACAAGTACTAGATCTTTCTTATAATAAATTTAATGGATCCATACCTCTAGAGGTTTTTAGTCTTTCTTCTTTATCAAACTTATTGGACTTGTCACATAACACTTTGAGTGGTAGCATACCAAGAGAAGTGGGTATGTTAAAAAATATTGACATGCTAGATCTATCTGAGAATCGTCTATCTGGTGATATTCCTAGAACAATTGGTGAATGCACAACCTTAGAATACCTTCAATTGCAAGGGAACTCCTTCAGCGGAACAATACCATCCTCTATGGCTTCTCTCAAAGGTCTTCAAAGTTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGTTATGAAGAGTATCTCTGGTTTGGAATACTTGAATGTTTCTTTTAACTTATTGGAAGGAGAGGTACCAACAAATGGTGTATTTGGAAATGTATCTCAAATAGAAGTGATTGGAAACAAAAAGCTTTGTGGAGGTATTTCAGAGTTGCATCTACCATCATGCCCTATCAAGGATAGTAAACATGCAAAAAAACATAATTTCAAGTTGATAGCAGTGATAGTTAGCGTGATTTCTTTTCTGCTCATACTTTCATTTGTTATTTCTATCTGCTGGATGAGGAAGAGAAACCAAAACCCATCCTTTGATTCACCAACTATTGATCAACTAGCTAAGGTTTCATATCAAGACTTACACCGAGGAACCGATGGGTTCTCAGAAAGAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGTGACAGAAGACAATGTTGTTGCCGTAAAGGTCTTGAACCTCAAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATTTTGACATGTTGTTCTAGTACAGATTACAAAGGTCAAACTTTTAAAGCTCTTGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCTTGAGATTTTAAATGCAGATCATCCAAGAACATTGGACCTTGGTCATAGATTAAACATCATGAACGATGTCGCCACTGCATTACATTATCTTCACCAAGAATGTGAACAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGCCATTGACGATACCTCTCACAAGGAAACTAGTACAATTGGAATAAAAGGAACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCAACATCTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATACTTACCGGTAGAAGACCCACTGATGAAGTTTTTCAAGATGGTCAAAATCTACATAACTTTGTAGCAACTTCGTTTCCTGGTAACATTATAGAGATTTTGGACCCACATCTTGAAGCAAGAGATGTAGAAGTAACAATACAAGATGGAAACCGAGCGATTCTAGTTCCTGGGGTAGAGGAATCCTTAGTTTCACTTTTTAGAATTGGACTTATTTGTTCAATGGAATCACCGAAAGAAAGAATGAATATTATGGATGTTAATCAAGAGCTTAACACAATCCGAAAGGCCTTTCTTGCTGGTTTTCGTACTCCTAATAATTAA 3093 0.3531 MKSFSLVSSTLLYLHLLFLFTLNLMQFGTNKMVAVAQLGNQSDHLALLKFKESISSDPYKALESWNSSIHFCKWYGITCNPMHQRVIELDLGSYRLQGRLSPHVGNLTFLIKLKLENNTFYGEIPQELGQLLQLQQLFLTNNSFAGEIPTNLTYCSNLKVITLAGNKLIGKIPIEIGYLKKLQSLSVWNNNLTGGISSSIGNLSSLMLFSVPSNNLEGDIPQEICRLKNLRGLYMGVNYLSGMVPSCIYNMSLLTELSLVMNNFNGSLPFNMFHNLPNLIIFEFGVNQFTGPIPISIANASALQSLDLGDQNNLVGQVPNLGKLQDLQRLNLQSNNLGNNSAIDLMFLRYLTNCTKLKLFSIAGNNFGGNFPNSIGNLSAELKQLYIGENQISGKIPAELGHLVGLILLAMNFNHFEGIIPTTFGKFQKMQVLILSGNKLSGDIPPFIGNLSQLFDLELNFNMFQGNIPPTIGNCQNLQVLDLSYNKFNGSIPLEVFSLSSLSNLLDLSHNTLSGSIPREVGMLKNIDMLDLSENRLSGDIPRTIGECTTLEYLQLQGNSFSGTIPSSMASLKGLQSLDLSRNQLSGSIPDVMKSISGLEYLNVSFNLLEGEVPTNGVFGNVSQIEVIGNKKLCGGISELHLPSCPIKDSKHAKKHNFKLIAVIVSVISFLLILSFVISICWMRKRNQNPSFDSPTIDQLAKVSYQDLHRGTDGFSERNLIGSGSFGSVYKGNLVTEDNVVAVKVLNLKKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYKGQTFKALVFDYMKNGSLEQWLHLEILNADHPRTLDLGHRLNIMNDVATALHYLHQECEQLVLHCDLKPSNVLLDDDMVAHVSDFGIARLVSAIDDTSHKETSTIGIKGTVGYAPPEYGMGSEVSTSGDMYSFGILMLEILTGRRPTDEVFQDGQNLHNFVATSFPGNIIEILDPHLEARDVEVTIQDGNRAILVPGVEESLVSLFRIGLICSMESPKERMNIMDVNQELNTIRKAFLAGFRTPNN* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1075 1030 Gene3D Ribonuclease Inhibitor 349 646 IPR032675 -
Mtr5g1075 1030 Gene3D Ribonuclease Inhibitor 209 348 IPR032675 -
Mtr5g1075 1030 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Mtr5g1075 1030 ProSiteProfiles Protein kinase domain profile. 715 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1075 1030 SMART serkin_6 715 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1075 1030 SMART LRR_sd22_2 524 556 - -
Mtr5g1075 1030 SMART LRR_sd22_2 475 496 - -
Mtr5g1075 1030 SMART LRR_sd22_2 179 205 - -
Mtr5g1075 1030 SMART LRR_sd22_2 572 601 - -
Mtr5g1075 1030 PANTHER LRR RECEPTOR-LIKE KINASE 28 1023 - -
Mtr5g1075 1030 Gene3D Ribonuclease Inhibitor 40 198 IPR032675 -
Mtr5g1075 1030 Gene3D Phosphorylase Kinase; domain 1 696 796 - -
Mtr5g1075 1030 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Mtr5g1075 1030 SMART LRR_typ_2 427 451 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 403 426 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 475 499 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 524 548 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 596 621 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 131 155 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 251 275 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 572 595 IPR003591 -
Mtr5g1075 1030 SMART LRR_typ_2 179 203 IPR003591 -
Mtr5g1075 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Mtr5g1075 1030 SUPERFAMILY Protein kinase-like (PK-like) 688 1014 IPR011009 -
Mtr5g1075 1030 SUPERFAMILY L domain-like 382 635 - -
Mtr5g1075 1030 SUPERFAMILY L domain-like 41 337 - -
Mtr5g1075 1030 Pfam Protein kinase domain 716 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1075 1030 Gene3D Transferase(Phosphotransferase) domain 1 797 1023 - -
Mtr5g1075 1030 PANTHER OS04G0122200 PROTEIN 28 1023 - -
Mtr5g1075 1030 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1075 Mtr-Chr5 10761758 10765535 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1075 40 1027 Receptor kinase-like Gene Family AT3G47570 45.045 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1075 Pkinase 5.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1075 - - mtr:MTR_5g025930 1324.69