Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1070 ATGCATAACAGAAAAACAATGAAAGGAGGAAGAACCTTTTGTGTTCCCACTCAACTATCAAAACAGTTTATAATAACTACACAACATATTCAAATTTCACAATTTAAAATAGTCCCTTGTTCCTCAAAACCTTTGTTTGTCATGTTTCCAACATTTTCATTTTGGTTATATCTTCTCTTTGCTCTCAACTTTGTCCAAAACACAATTACCTCTACCTTAAGAAACGAGACGGATTACTTAGCGTTGCTCAAATTCAAAGAATCAATATCTAATGACCCGTATGAGATCTTGAGCTCTTGGAATACTTCAACTCACTACTGCAACTGGCACGGGATTGCGTGTAGTCTCATGCAACAAAGAGTTATAGAGTTAGACTTAGATGGATATAACTTGCATGGATTCATATCTCCCCATGTTGGCAATCTCTCTTTTTTGATAAGTCTCAACCTTGCAAACAATAGTTTCTTTGGTAAAATCCCACATGAACTCGGTCGATTGTTCCGATTGCAGGAACTCTTGATTAATAACAACTCCATGACAGGGGAGATTCCTACAAACTTGTCAAGTTGCTCTGATCTTGAAGTCTTATACTTACAGAGAAATCATTTGGTTGGTAAAATACCAATTGGCATCAGCTCTCTTCATAAACTACAAATGTTGGGGATTTCAAACAACAATCTAACCGGAAGAATTCCACCCTTCATAGGAAATCTTTCATCCCTAATTGTGCTTTCAGTGGGTAATAATCACTTAGAGGGAGAAATTCCGGTAGAAATCTGCAGCCTCAAAAACTTGACAGGGTTGGCATTGGCTGTCAACAAACTACGTGGTTCATTTCCTTCTTGTCTTTATAATATGTCATCTCTAACTGGGATCTCAGTTGGACCCAATGATTTTAATGGATCTCTTCCATCCAATATGTTCAACACCCTCTCCAATCTTCAATATTTCGCAATCGGAAGAAATGAATTTTCAGGTACAATCCCTATTTCCATTGCAAATGCTTCTTCCCTTCTACAACTCGACTTAAGTCGAAACAATTTTGTCGGACAAGTTCCAAGTCTAGGGAAGCTACATAATCTTCAACGACTAAATCTAGGATCAAACAAATTAGGTGACAATTCAACTAAGGATTTGGAGTTTTTGAAAACCTTGACAAACTTCACTAAACTAAGAGTGATTTCTATATCCAGTAATCATTTTGGGGGTAACTTGCCAAATTTTGTAGGCAATTTATCCACTCAACTTAGTCAGCTATATGTTGGGGGTAATCCAATATCAGGAAAAATTCCTGCAGAATTAGGAAATCTAATTGGCCTAATTCACTTGAGCATGGACAATAGCAACTTTGAAGGAATTATTCCTAATACTTTTGGGAAGTTTGAGAGAATGCAACAATTACTATTGAATGGAAATAAGTTGTCAGGAGAGGTACCATCCATTATAGGCAACCTCAGTCAATTATATCTTTTGAGTATAAGAGATAATATGTTAGGAGGAAATATTCCTTCAAGCATAGGACATTGCCAAAAGCTACAATCCCTAGACCTTTCACAAAACATTCTTAGAGGAACCATACCCAAAAAGGTCTTTAGTCTTTCCTCTTTAACAAACTTACTGAACTTGTCAAAAAACTCATTGAGTGGTAGCCTACCAATAGAAGTGGGTAAACTAATAAGTATCAACAAGCTAGATGTCTCAGATAATTATCTATCTGGTGAAATTCCAGTAACCATTGGTGAATGCATAGTCTTAGATAGCCTTTATTTGCAAGGGAACTCTTTCAACGGAACCATACCATCCTCATTGGCTTCACTTAAAGGTCTTCAATATCTAGACTTGTCAGGAAATCGATTGTCTGGACCGATTCCAAATGTTCTACAGAATATATCAGTTTTAAAACACTTGAATGTATCTTTCAACATGTTGGAAGGCGAGGTACCAATGGAAGGTGTCTTTGGAAATGTAAGCAGGTTAGTTGTGACTGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGCTTCATCTACAACCATGCCCTGCCAAATATATTAATTTTGCAAAACACCATAATATCAAATTGACGGTCGTGATAGTTAGTGTGGCAGCTATTCTTCTCACAGTGACAATTGTTCTAACTATCTATCAAATGAGGAAAAAAGTTGAGAAAAAAAATTCTGATCCACCAATAATTGACCCGCTTGCCAGAGTTTCATATCAAGACCTTCACCAAGGAACTGATGGATTTTCTGCTAGAAACCTTGTTGGATTAGGAGGTTTTGGTTCTGTCTACAAAGGAAATCTTGCATCAGAAGATAAATTTGTTGCCATAAAGGTTCTGAACCTTCAAAATAAGGGAGCTCACAAGAGCTTCATTGTTGAATGTAATGCACTAAAAAATATGAGGCATAGAAATTTGGTCAAGGTTTTGACATGTTGTTCAAGTACAGATTACAAAGGTCAAGAGTTTAAGGCTTTAGTGTTTGAATACATGAACAATGGAAGCCTAGAACAATGGCTACATCCAGGTATAATGAATGCAGGGATTCAAAGATTGTTGGACCTTGATCAACGACTGAATATCATTGTTGACATTGCTAGTGTATTACATTACCTTCATCACGAATGTGAGCAAGCGGTCATTCATTGTGATCTAAAGCCAAGTAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGCCATTGACGATACCTCTCACAAGGAATTTAGTACAATTGGAATTAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAGATATCCACACATGGTGACATGTATAGCTTCGGGGTGCTTCTGTTGGAAATGCTTACCGGAAGAAGACCAACGGATGAAATGTTTGAAGAGGGTCAAAATCTGCATATATTTGTTGAAATTTCATTTCCAAATAATATTTTACAGATTTTGGACCCACATCTTGTACCAAGAAATGAAGAAGCCAAAATAGAAGAAGGAAAGAGTGGAAATTTCCCTCCAATCGTAGAGAAGTGCTTAGTTTCACTTTTTCGGATTGGACTTGCATGTTCAGTGAAATCACCAAAAGAAAGAATGAATATAGTTGATGTCACCAGAGAGTTAAGCATAATCAAAAAGGCATTTCTTTCCGGTGGGATTGATTTAGAATTTTAG 3195 0.3706 MHNRKTMKGGRTFCVPTQLSKQFIITTQHIQISQFKIVPCSSKPLFVMFPTFSFWLYLLFALNFVQNTITSTLRNETDYLALLKFKESISNDPYEILSSWNTSTHYCNWHGIACSLMQQRVIELDLDGYNLHGFISPHVGNLSFLISLNLANNSFFGKIPHELGRLFRLQELLINNNSMTGEIPTNLSSCSDLEVLYLQRNHLVGKIPIGISSLHKLQMLGISNNNLTGRIPPFIGNLSSLIVLSVGNNHLEGEIPVEICSLKNLTGLALAVNKLRGSFPSCLYNMSSLTGISVGPNDFNGSLPSNMFNTLSNLQYFAIGRNEFSGTIPISIANASSLLQLDLSRNNFVGQVPSLGKLHNLQRLNLGSNKLGDNSTKDLEFLKTLTNFTKLRVISISSNHFGGNLPNFVGNLSTQLSQLYVGGNPISGKIPAELGNLIGLIHLSMDNSNFEGIIPNTFGKFERMQQLLLNGNKLSGEVPSIIGNLSQLYLLSIRDNMLGGNIPSSIGHCQKLQSLDLSQNILRGTIPKKVFSLSSLTNLLNLSKNSLSGSLPIEVGKLISINKLDVSDNYLSGEIPVTIGECIVLDSLYLQGNSFNGTIPSSLASLKGLQYLDLSGNRLSGPIPNVLQNISVLKHLNVSFNMLEGEVPMEGVFGNVSRLVVTGNNKLCGGISELHLQPCPAKYINFAKHHNIKLTVVIVSVAAILLTVTIVLTIYQMRKKVEKKNSDPPIIDPLARVSYQDLHQGTDGFSARNLVGLGGFGSVYKGNLASEDKFVAIKVLNLQNKGAHKSFIVECNALKNMRHRNLVKVLTCCSSTDYKGQEFKALVFEYMNNGSLEQWLHPGIMNAGIQRLLDLDQRLNIIVDIASVLHYLHHECEQAVIHCDLKPSNVLLDDDMVAHVSDFGIARLVSAIDDTSHKEFSTIGIKGTVGYAPPEYGMGSEISTHGDMYSFGVLLLEMLTGRRPTDEMFEEGQNLHIFVEISFPNNILQILDPHLVPRNEEAKIEEGKSGNFPPIVEKCLVSLFRIGLACSVKSPKERMNIVDVTRELSIIKKAFLSGGIDLEF* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1070 1064 Gene3D Ribonuclease Inhibitor 74 354 IPR032675 -
Mtr5g1070 1064 Gene3D Transferase(Phosphotransferase) domain 1 831 1056 - -
Mtr5g1070 1064 ProSitePatterns Protein kinases ATP-binding region signature. 755 778 IPR017441 GO:0005524
Mtr5g1070 1064 SMART serkin_6 749 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1070 1064 ProSiteProfiles Protein kinase domain profile. 749 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1070 1064 PANTHER OS04G0122200 PROTEIN 64 1058 - -
Mtr5g1070 1064 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Mtr5g1070 1064 Gene3D Phosphorylase Kinase; domain 1 730 830 - -
Mtr5g1070 1064 SUPERFAMILY Protein kinase-like (PK-like) 725 1049 IPR011009 -
Mtr5g1070 1064 PANTHER LRR RECEPTOR-LIKE KINASE 64 1058 - -
Mtr5g1070 1064 SUPERFAMILY L domain-like 414 669 - -
Mtr5g1070 1064 Pfam Leucine rich repeat N-terminal domain 76 115 IPR013210 -
Mtr5g1070 1064 Pfam Leucine rich repeat 585 643 IPR001611 GO:0005515
Mtr5g1070 1064 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Mtr5g1070 1064 Pfam Protein kinase domain 752 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1070 1064 SUPERFAMILY L domain-like 76 371 - -
Mtr5g1070 1064 Gene3D Ribonuclease Inhibitor 355 685 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1070 Mtr-Chr5 10679506 10683733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1070 70 1056 Receptor kinase-like Gene Family AT3G47570 43.988 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1070 Pkinase 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1070 - - gmx:100785561 1310.05