Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1065 ATGAAGTCATTTTCTTGCTTGTCAAGGATACTTATGTACATACACCTTCATCTTCTTTTTCTGTTTACCTTAAATATAATGTGGTTTGGTACAAACAAAACTGTGGCAGTGGCATTAGGAAACCAAACTGATTATTTGTCATTGCTTAAATTCAAAGAATCAATATCCAATGATCCAAATGGAGTCTTAGATTCTTGGAATTTTTCCATCCATTTATGTAAGTGGCGTGGAGTCACATGCAGCTCTATGCAACAAAGAGTTATAGAGTTGAACCTTGAAGGATATCAGTTGCATGGATCCATATCACCATATGTAGGCAATCTTACTTTTCTTACAACCTTGAATCTCATGAACAACAGCTTCTATGGAACAATCCCGCAGGAGTTGGGTCAGTTGCTACAATTGCAACAACTTTATCTCATCAATAACTCTTTTGCAGGAGAAATTCCTACAAACCTGACACATTGCTCCAATCTCAAAGAGTTACGTTTGGGAGGAAACAATTTGATTGGCAAAATACCGATTGAAATTGGCTCTTTGAAAAAGCTTCAATATGTGACCATTTGGAAAAACAAATTAACCGGAGGAATTCCTTCATTCGTAGGGAATCTTTCATGCTTAACGCGTTTTTCAGTTACTTCAAACAACTTAGAAGGGGATATTCCACAAGAAACATGTCGTCTCAAAAATTTGAGAGGTTTATTTATGGGTGTAAACTATTTGTCTGGTATGATTCCTTCTTGTCTTTACAATATCTCAGCACTTACTGAACTCTCACTAACCATGAATAGATTTAATGGCTCACTTCCACCCAACATGTTTTACACCCTCCCTAATCTCAAATCTTTTGAACCTGGAGGAAATCAATTCTCAGGTCCAATCCCTGTTTCCATTGCAAATGCTTCTTCCCTACAAATAATTGATTTAGGTCAAAACAATTTGGTTGGACAAGTTCCAAGTCTAGAGAAGTTACCAGATCTTTACTGGCTGAGTTTGGAATACAACTATTTCGGTAACAATTCAACTATAGATTTAGAGTTTTTAAAATATTTGACAAACTGTAGTAAACTAGAAAAGCTTTCTATATCTAATAATAAGTTTGGAGGTAGTTTGCCAAATTTCATTGGCAATTTATCCACCCATCTTAGACAGCTATATCTTGGAGGTAATATGATAACAGGAAAAATTCCCATGGAAATAGGAAATTTGGTTGGCTTAACTCTCTTGTCCATGGAACTTAACCAATTTGATGGAATTGTTCCGTCTACTTTAGGGAAGTTCCAAAATATGCAAATTTTGGATCTAAGCGAAAACAAGTTGTCAGGATATATACCACCCTTCATAGGCAATCTCAGTCAATTGTTTAGGTTGGCTGTACACAGTAACATGTTTCAAGGAAATATTCCTCCAAGCATAGGAAATTGTCAAAAGTTACAATACCTAGATCTTTCTCATAATAAACTTAGTGGATCCATACCTTTAGAGATTTTTAATCTTTTTTATTTATCAAATTTATTGAACTTGTCGCATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAAAATATTAATATGCTAGATGTATCTGAGAATCAACTATCTTCTTATCTTCCTAGAACAGTTGGTGAATGTATAAGTTTAGAATACCTTCTTTTGCAAGGTAACTCCTTCAATGGAACAATACCTTCCTCTTTGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAACAAATCAATTGTCTGGATCAATTCCTGATGTTATGCAGGATATCTCATGTTTAGAACACTTGAATGTTTCTTTTAACATGCTGGAAGGTGAGGTCCCGACAAATGGTGTCTTTAGAAATGCATCCAAAGTAGCAATGATTGGAAACAATAAGCTTTGTGGAGGTATTTCTCAGCTGCATCTAGCACCATGCCCTATCAAGGGTAGGAAACACCCAAAACACCATATATTCAGGCTGATAGCAGTGATAGTTAGCATGGTTTCTTTTCTTCTCATATTTTTATTTATTATAACTATCTACTGGGTAAGGAAAATAAATCAAAAAAGATCTTTCGATTCACCACCAAATGATCAAGAAGCTAAGGTTTCATTCCGAGACTTATACCAAGGAACCGATGGGTTCTCAGATAGAAACTTGATCGGATCAGGAAGTTTTGGTGATGTGTACAGAGGAAATCTTGTGTCAGAAGACAATGTTGTTGCTATAAAGGTCTTCAACCTCCAAAACAATGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTAAAATTTATTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCCCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCCAAGGTTTTAAATGAAGAGCATACAGCAACATTGGACCTCAGTCATAGATTAAACATCATTATGGATGTTGGTTCTGCATTACATTATCTTCATAATGAATGTGAGCAATTGGTCCTTCATTGTGATATAAAGCCAAGCAATGTCCTACTTGATGATGATATGGTTGCACATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCGGCCATTGGTGGTTCCTCTCATAAGAATACTAAGACAATTGGAATTAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGGATGGGTGCTGAAGTATCCACATGTGGTGATATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATGAGGCATTTGAAGATGATCAAAATCTACATAACTTTGTTGCAACACTGTTTCCTGCTAATCTTATAAAGATCTTGGACCCACATCTTGTGTCAAAATATGCAGAAGTAGAAATACAAGATGGAAAGAGTGAGAATCTTATTCCAAGTTTAAAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTCTTTGTTCAATGGAATCACCCAAAGAAAGAATGAATATTGTGGATGTTACTAGAGAACTTAACACAATCCATAAAGCCTTTCTCACTGGTTTTCTGTTACAGCCCAAATATGTTAATCCCCAAGTCCAAGTTGCATTAGATATTTTAGGTCACGAGTCAAGCTCTCTTGAAGGATCTGGATCAGTCTAA 3171 0.3598 MKSFSCLSRILMYIHLHLLFLFTLNIMWFGTNKTVAVALGNQTDYLSLLKFKESISNDPNGVLDSWNFSIHLCKWRGVTCSSMQQRVIELNLEGYQLHGSISPYVGNLTFLTTLNLMNNSFYGTIPQELGQLLQLQQLYLINNSFAGEIPTNLTHCSNLKELRLGGNNLIGKIPIEIGSLKKLQYVTIWKNKLTGGIPSFVGNLSCLTRFSVTSNNLEGDIPQETCRLKNLRGLFMGVNYLSGMIPSCLYNISALTELSLTMNRFNGSLPPNMFYTLPNLKSFEPGGNQFSGPIPVSIANASSLQIIDLGQNNLVGQVPSLEKLPDLYWLSLEYNYFGNNSTIDLEFLKYLTNCSKLEKLSISNNKFGGSLPNFIGNLSTHLRQLYLGGNMITGKIPMEIGNLVGLTLLSMELNQFDGIVPSTLGKFQNMQILDLSENKLSGYIPPFIGNLSQLFRLAVHSNMFQGNIPPSIGNCQKLQYLDLSHNKLSGSIPLEIFNLFYLSNLLNLSHNSLSGSLPREVGMLKNINMLDVSENQLSSYLPRTVGECISLEYLLLQGNSFNGTIPSSLASLKGLRYLDLSTNQLSGSIPDVMQDISCLEHLNVSFNMLEGEVPTNGVFRNASKVAMIGNNKLCGGISQLHLAPCPIKGRKHPKHHIFRLIAVIVSMVSFLLIFLFIITIYWVRKINQKRSFDSPPNDQEAKVSFRDLYQGTDGFSDRNLIGSGSFGDVYRGNLVSEDNVVAIKVFNLQNNGAHKSFIVECNALKFIRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPKVLNEEHTATLDLSHRLNIIMDVGSALHYLHNECEQLVLHCDIKPSNVLLDDDMVAHVSDFGIARLVSAIGGSSHKNTKTIGIKGTVGYAPPEYGMGAEVSTCGDMYSFGILMLEMLTGRRPTDEAFEDDQNLHNFVATLFPANLIKILDPHLVSKYAEVEIQDGKSENLIPSLKECLVSLFRIGLLCSMESPKERMNIVDVTRELNTIHKAFLTGFLLQPKYVNPQVQVALDILGHESSSLEGSGSV* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1065 1056 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Mtr5g1065 1056 ProSiteProfiles Protein kinase domain profile. 715 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1065 1056 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Mtr5g1065 1056 Gene3D Ribonuclease Inhibitor 344 643 IPR032675 -
Mtr5g1065 1056 PANTHER OS04G0122200 PROTEIN 29 1023 - -
Mtr5g1065 1056 Pfam Protein kinase domain 717 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1065 1056 PRINTS Leucine-rich repeat signature 478 491 - -
Mtr5g1065 1056 PRINTS Leucine-rich repeat signature 572 585 - -
Mtr5g1065 1056 SUPERFAMILY Protein kinase-like (PK-like) 697 1014 IPR011009 -
Mtr5g1065 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Mtr5g1065 1056 Gene3D Phosphorylase Kinase; domain 1 680 796 - -
Mtr5g1065 1056 Gene3D Ribonuclease Inhibitor 41 203 IPR032675 -
Mtr5g1065 1056 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Mtr5g1065 1056 ProSiteProfiles Leucine-rich repeat profile. 477 499 IPR001611 GO:0005515
Mtr5g1065 1056 PANTHER LRR RECEPTOR-LIKE KINASE 29 1023 - -
Mtr5g1065 1056 SUPERFAMILY L domain-like 42 337 - -
Mtr5g1065 1056 Pfam Leucine Rich Repeat 477 496 IPR001611 GO:0005515
Mtr5g1065 1056 SMART LRR_typ_2 403 426 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 475 499 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 524 548 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 427 451 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 252 276 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 204 228 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 596 621 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 572 595 IPR003591 -
Mtr5g1065 1056 SMART LRR_typ_2 132 156 IPR003591 -
Mtr5g1065 1056 Gene3D Transferase(Phosphotransferase) domain 1 797 1023 - -
Mtr5g1065 1056 SUPERFAMILY L domain-like 381 635 - -
Mtr5g1065 1056 Gene3D Ribonuclease Inhibitor 208 343 IPR032675 -
Mtr5g1065 1056 SMART serkin_6 715 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1065 Mtr-Chr5 10629337 10633154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1065 41 1021 Receptor kinase-like Gene Family AT3G47570 45.665 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1065 Pkinase 7.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1065 - - mtr:MTR_5g025930 1326.61