Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1061 ATGGTTGCATCCTCAGATTTAAGTGCAGAACCTCTAACAACATTGAACCTTGGTCATAGATTAAACATCATTATGGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATCAAGACTTGTCTCAGCCATTTGTGGTACCACTCATAAGAATACTAGTACAACTGGAATAAAAGGAACAATTGGCTATGCTCCTCTGGAGTATGGGATGGGTTCTGAAGTATCTGCATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATCACGCTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATATCATTTCCTGCTAATCTTAAGAAAATTTTGGACCCACATCTTTTATCAAGGGACGCAGAAGTAGAAATGGAAGATGGAAATCTTGAGAATCTTATTCCAGCTGCAAAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATGTGTTCAATGGAGTCACCAAAAGAAAGACTGAATATTGAGGATGTATGTATAGAGCTTAGTATAATCAGAAAGGCCTTTCTTGCCGGTGAGATAAACTGA 582 0.3832 MVASSDLSAEPLTTLNLGHRLNIIMDVASALHYLHRESRLVSAICGTTHKNTSTTGIKGTIGYAPLEYGMGSEVSACGDMYSFGILMLEMLTGRRPTDHAFEDGQNLHNFVAISFPANLKKILDPHLLSRDAEVEMEDGNLENLIPAAKECLVSLFRIGLMCSMESPKERLNIEDVCIELSIIRKAFLAGEIN* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1061 193 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1061 193 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 38 190 - -
Mtr5g1061 193 SUPERFAMILY Protein kinase-like (PK-like) 14 177 IPR011009 -
Mtr5g1061 193 Gene3D Transferase(Phosphotransferase) domain 1 38 185 - -
Mtr5g1061 193 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 38 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1061 Mtr-Chr5 10601314 10602091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1061 10 188 Receptor kinase-like Gene Family AT3G47580 34.762 4.43e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1061 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1061 - - mtr:MTR_5g025880 330.102