Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1059 ATGTCTTTTTCTTCGTTGTCATCTATACTTTTATACCTTCATCTTCTTTTTCTTTTTACCTTAAATTTAATGTGGTTTACCACAAACAAAATGGTGGCAGTGGCTGCATTAGGAAACCAAACAGATCATTTAGCATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCATACAATGCTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGCAGGGAATCACTTGCAACCCCATGCATCAAAGAGTTATAGAGTTGAACCTAAGAAGTAATCACTTACATGGATCTTTATCTCCCTATGTTGGCAATCTCACCTTTTTGATAAATCTCGACCTTGGAAACAATAGTTTTTCTGGAGAAATCCCACCGGAGTTGGGTCAGTTGCTACAACTGCAACACCTTTATCTCCTTAATAACTCGTTTGTAGGAGAAATTCCTACAAACTTGACATATTGCTCCAATCTCATAGACTTGATTTTGGGAGGGAACAAATTGATTGGGAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTCATTCATTCCACCTTTTTGGTAACAATTTAACTGGAGGGATCCCTTCATCCATAGGGAACCTTTCATCCTTAGTGCGTTTTACGTGTGCTTCTAACAAATTAGGAGGAGATATTCCACGTGAAGTATGCCGCCTCAAAAACTTGACACTTTTATTGTTGGGTGAGAACAAATTGTCTGGTATGATTCCTCCTTGTATTTACAATATGTCATCACTAATTGAGCTCTCACTAGTCATGAATAACTTTACTGGCTATCTTCCATCCAACATGTTCAACAACTTCCCTGGTCTAACTGTTTTTGAAATTGGAGCAAATCAATTCTCAGGTCCAATCCCTATTTCCATTGTAAATGCTTCTTCCCTACAAGTACTCGACTTAGCTCAAAACTATTTGGTGGGACAAGTTCCAAGTCTAGAGAAGTTACAAGATCTTTACTGGCTAAGTTTTGGATACAACAATTTAGGTAACAATTCAATTATAGATTTAGAGTTTTTAAACTATTTGACAAATTGTAGTAAACTAGAAATGCTTTCGATAGCTTCTAATAATTTTGGAGGTCATTTGCCAAATTTCATTGGCAATTTATCTATCCAACTTACACAACTATATCTTGGGGGAAATATGATATCAGGAAAAATTCCCGTGGAAATAGGAAATCTAGTTGGCTTAATTCTCTTGACCATGGAGTCTAACCTCTTTGTAGGAGTTATTCCAACTACTTTTGGGAAGTTCGAAAAGATGCAGATATTATATTTGGGTGGAAACAAGTTGTCAGGTGATATGCCACCTTTTATAGGTAATCTCAGTCAGTTGTATGATTTAGAATTAGCTCATAATATGTTTGAAGGAAATATTCCTCCTAGCATAGGAAATTGTCAAAATTTACAAGTACTAGATCTTTCTTATAATAAATTTAATGGATCCATACCTCTAGAGGTTTTTAGTCTTTCTTCTTTAACAAACTTATTGAACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAACTGGGTGTCTTAAAAAATCTTGAAATATTAGATGTCTCTAAGAATCATTTATCTGGTGATATTCCTACAGAAATTGGCGAATGTATAAGCTTAGAATATCTTATGTTGCAAGGGAACGCCTTCAACAGAACAATACCGTCCTCTATGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCTGATGTTATGCAAAATATCTCTGTTTTAGAATATTTGAATGTTTCTTTTAACATGTTGGAAGGAGATGTACCATTAAATGGTGTATTTGGAAATGTAACCCAAATAGAAGTGATTGGAAACAAAAAGCTTTGTGGAGGTATTTCCCAGCTGCATCTACCACCATGCCCTATCAAGGGTAGGAAACATGCAAAACAGAAAAAGATCAGGTTGATGGCAGTGATAATTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATCATAACTATCTACTGGATGAGGAAAAGAAATCCAAAGCGATCTTGTGATTCACCAACAGTTGATCAACTATCTAAGGTTTCGTACCAAGAATTACATCAAGGAACCGATGGGTTCTCAACTAGAAACTTGATAGGATCAGGAAGTTTTGGTCTTGTGTACAAAGGAAATCTTGTGTCAGAAGATAATGTTGTTGCCGTAAAGGTCCTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTCGACACCGAAATTTAGTTAAGGTTTTAACCTGTTGTTCAAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTGGTTTTTGAGTACATGAAAAATGGAAGCTTAGATCAATGGTTGCATCCTGAGATTTTAAATGCAGAACCCCCAACAACATTGGACTTTGCTCATAGATTATACATTATTATCGATGTTGCTTCTGCATTACATTATCTTCATAGAGAATGTGAAGAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATATCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCGTCTCAGCTATTGGCAGTACCTCTTATAAAAATACAAGTACAATTGAAGTTAAAGGAACAGTAGGCTATTCTCCTCCTGAGTATGGGATGGGTGCTGAAGTATCCACATGTGGTGATATGTATAGCTTTGGAATCTTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATCACGCTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATATCATTTCCTGGTAATCTTAAGAAGATTTTGGACCCACATCTTTTATCAATGGATGCAGAAGTTGAAATGAAAGATGGAAATCATGAGAATCTTATTCCACCTGCAAAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATGTGTTCAATGGAGTCACCAAAAGAAAGAATCAACATTGAGGTTGTATGTAGAGAGCTTAGTATAATCAGAAAGGCCTTTCTTGCTGGTGCTCAAACTCATAATTAG 3084 0.3606 MSFSSLSSILLYLHLLFLFTLNLMWFTTNKMVAVAALGNQTDHLALLKFKESISSDPYNALESWNSSIHFCKWQGITCNPMHQRVIELNLRSNHLHGSLSPYVGNLTFLINLDLGNNSFSGEIPPELGQLLQLQHLYLLNNSFVGEIPTNLTYCSNLIDLILGGNKLIGKIPIEIGSLKKLHSFHLFGNNLTGGIPSSIGNLSSLVRFTCASNKLGGDIPREVCRLKNLTLLLLGENKLSGMIPPCIYNMSSLIELSLVMNNFTGYLPSNMFNNFPGLTVFEIGANQFSGPIPISIVNASSLQVLDLAQNYLVGQVPSLEKLQDLYWLSFGYNNLGNNSIIDLEFLNYLTNCSKLEMLSIASNNFGGHLPNFIGNLSIQLTQLYLGGNMISGKIPVEIGNLVGLILLTMESNLFVGVIPTTFGKFEKMQILYLGGNKLSGDMPPFIGNLSQLYDLELAHNMFEGNIPPSIGNCQNLQVLDLSYNKFNGSIPLEVFSLSSLTNLLNLSHNSLSGSLPRELGVLKNLEILDVSKNHLSGDIPTEIGECISLEYLMLQGNAFNRTIPSSMASLKGLRYLDLSRNQLSGSIPDVMQNISVLEYLNVSFNMLEGDVPLNGVFGNVTQIEVIGNKKLCGGISQLHLPPCPIKGRKHAKQKKIRLMAVIISVVSFLLILSFIITIYWMRKRNPKRSCDSPTVDQLSKVSYQELHQGTDGFSTRNLIGSGSFGLVYKGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKVLTCCSSTDYKGQEFKALVFEYMKNGSLDQWLHPEILNAEPPTTLDFAHRLYIIIDVASALHYLHRECEELVIHCDLKPSNILLDDDMVAHVSDFGIARLVSAIGSTSYKNTSTIEVKGTVGYSPPEYGMGAEVSTCGDMYSFGIFMLEMLTGRRPTDHAFEDGQNLHNFVAISFPGNLKKILDPHLLSMDAEVEMKDGNHENLIPPAKECLVSLFRIGLMCSMESPKERINIEVVCRELSIIRKAFLAGAQTHN* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1059 1027 SUPERFAMILY L domain-like 40 335 - -
Mtr5g1059 1027 SUPERFAMILY L domain-like 379 633 - -
Mtr5g1059 1027 Gene3D Transferase(Phosphotransferase) domain 1 795 1024 - -
Mtr5g1059 1027 SMART serkin_6 713 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1059 1027 PANTHER OS04G0122200 PROTEIN 27 1022 - -
Mtr5g1059 1027 Gene3D Ribonuclease Inhibitor 283 644 IPR032675 -
Mtr5g1059 1027 SUPERFAMILY Protein kinase-like (PK-like) 688 1012 IPR011009 -
Mtr5g1059 1027 Gene3D Ribonuclease Inhibitor 162 282 IPR032675 -
Mtr5g1059 1027 PANTHER LRR RECEPTOR-LIKE KINASE 27 1022 - -
Mtr5g1059 1027 Gene3D Ribonuclease Inhibitor 41 155 IPR032675 -
Mtr5g1059 1027 Gene3D Phosphorylase Kinase; domain 1 694 794 - -
Mtr5g1059 1027 ProSiteProfiles Protein kinase domain profile. 713 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1059 1027 SMART LRR_typ_2 226 250 IPR003591 -
Mtr5g1059 1027 SMART LRR_typ_2 474 497 IPR003591 -
Mtr5g1059 1027 SMART LRR_typ_2 106 130 IPR003591 -
Mtr5g1059 1027 SMART LRR_typ_2 570 593 IPR003591 -
Mtr5g1059 1027 SMART LRR_typ_2 449 473 IPR003591 -
Mtr5g1059 1027 SMART LRR_typ_2 522 546 IPR003591 -
Mtr5g1059 1027 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Mtr5g1059 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Mtr5g1059 1027 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Mtr5g1059 1027 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Mtr5g1059 1027 Pfam Protein kinase domain 715 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1059 Mtr-Chr5 10582889 10586445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1059 39 1025 Receptor kinase-like Gene Family AT3G47570 44.990 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1059 Pkinase 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1059 - - mtr:MTR_6g036870 1305.04