Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1058 ATGCTTCCTACATTTTTCATTTGGTTTTTTTCACTCCTTATTTTCAACTTCAGCCCAAAAACAATTGCATTTACAATAGGAAACCAGAGTGATTATTTGACATTGCTCAAGTTTAAGAAATTTATTTCCAATGACCCACATAGAATCCTTGATTCTTGGAATGGTTCTATCCATTTTTGCAACTGGTATGGAATCACATGCAACACCATGCATCAAAGAGTTACTGAGTTGAAGTTACCTGGATATAAGTTGCATGGATCCTTATCTTCTCATGCTGCCAATCTTACTTTTCTCAGACACGTCAACCTTGCAGACAACAAATTCTCTGGAAAAATCCCCCAAGAGTTGGGTCAGTTGTTACAATTACAGGAACTCTATCTCTCCAATAACTCATTCTCTGGAGAAATTCCTACAAACTTGACAAATTGTTTCAACCTTAAATACTTATCCTTGAGTGGGAATAATTTGATCGGAAAAATACCAATTGAAATAGGCTCTCTTCAAAAGCTTCAAGAATTGAATGTTGGAAGAAACAGTTTGATCGGAGGAGTCCCACCATTCATAGGTAATCTTTCAGTCTTAACAACTCTTTCCATTTCTCGTAACAACTTAGAGGGAGATATTCCCCAAGAAATATGTCGCCTAAAACACTTGACTAAAATAGCATTGGGGCTCAACAAACTATCTGGTACAGTTCCTTCATGTCTTTACAACATGTCATCTCTTGCTATCTTTTCATCTGCAGCCAATCAAATAGATGGCTCTCTTCCACCCAACATGTTCAACTCCCTCCCCAATCTCAAAGTGTTTGAAATTGGTGTCAATCAATTCTCGGGTCTAATGCCTACTTCTGTTGCAAATGCTTCTACCCTTAGAAAACTTGATATCAGCAGTAACCATTTTGTTGGACAAGTTCCAAATCTTGGGAGGTTACAATATCTTTGGAGGCTAAATTTGGAACTGAATAATTTTGGTGAAAATTCAACTAAGGATTTGATTTTTTTAAAATCATTGACTAACTGTAGTAAGTTGCAAGTGTGTTCTATATCCCATAATAATTTTGGAGGTAGTTTGCCAAATTTGGCAGGCAATTTATCCATCCAACTTAGTCAACTATATCTTGGGAGCAATCAAATATATGGGCAAATTCCTTCAGAATTAGGGAATCTAAATAGTTTAATTTCCTTGACCATGGAAAACAACCGTTTTGAAGGGACCATTCCAGATTCTTTTTGGAAGTTTCAAAAGATTCAAGTGTTAGATTTGAGTGGAAACCAATTGTCAGGACACATTCCAGGCTTCATAGGTAATTTTAGTCAGATGTATTATTTGAGTCTAGCACATAATATGTTAGGAGGAAATATTCCCCCAAGCTTCGGAAATTGTCACAATTTACATCACCTAAACCTTTCAAAAAATAATTTTAGAGGAACCATACCCTTGGAGGTTTTTAGTATTTCCTCATTATCAAACTCACTGGACTTGTCACAAAACTCATTGAGTGGAAACCTATCTGTTGAAGTGGGTAGGCTAAAAAATATTAATAAGCTAGATTTCTCTGAGAATAATTTGTCTGGTGAAATTCCTATAACCATTGATCAATGCAAAAGCTTAGAATACCTTTTTTTGCAAGGAAATTCCTTCCATCAAATCATACCTTCCTCTTTGGCTTATATAAGAGGTCTTCGATATTTAGACATGTCAAGAAATCAATTGTCTGGATCAATTCCTAACATTCTGCAAAATATTTCTCGTTTAGAACACTTGAACGTTTCATTTAACATGTTGGATGGAGAGGTTCCAAAAGAAGGTGTCTTTAGAAATGCTAGCAGGTTAGCGGTGTTCGGGAACAATAAGCTTTGTGGAGGTATTTCAGACTTGCACCTACCTCCATGCCCATTCAAACATAATACCCATTTGATAGTAGTGATAGTTAGCGTGGTTGCTTTCATTATTATGACAATGCTTATTCTAGCTATCTATTACTTGATGAGGAAAAGAAACAAGAAACCATCTTCAGATTCACCAATAATTGACCAACTTGCTATGGTTTCTTACCAAGACTTGTATCAGGCAACTGATGGCTTCTCATCTAGAAACTTGATTGGATCAGGAGGCTTTGGTTCGGTGTATAAAGGAAATCTTATGTCAGAAGATAAAGTTATTGCTGTGAAGGTCCTGGACCTTGAAAAGAATGGAGCTCACAAGAGTTTTATTACCGAATGTAATGCACTAAAAAATATTAGACATCGAAATCTGGTTAAGATTTTAACTTGTTGTTCTAGTATTGATTACAAAGGTCAGGAATTCAAAGCTCTAGTTTTTGAATACATGAAAAATGGAAGCTTAGAAAACTGGTTGCATTCAAGGATGATGAATGTAGAGCAACCAAGAGCATTGGATCTTAATCAAAGACTGAATATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTATTGATGAAGACAATGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCGTCTCATCTGCGGACGGTATATCTCCTAAGGAAACTAGCACAATTGGAATAAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTTTCCACACATGGTGACATGTATAGCTTTGGGATGCTTATATTGGAAATGATTACAGGAAGAAGACCAACTGATGAAATGTTTTTAGATGGTCAAAATCTGCATTTGTATGTTGAAAATTCATTTCCTAATAATGTTATGCAGATTTTGGACCCACATATTGTACCAAGAGAAGAGGAAGCAGCAATAGAAGATAGAAGCAAGAAGAATCTTATTTCATTAATACATAAATCCTTAGTTTCACTCTTTAGGATTGGACTTGCATGTTCGGTGGAATCGCCAACACAAAGAATGAATATATTGGATGTCACTAGAGAACTAAACATGATCAGAAAGGTTTTTCTTGCTGGTGTTCACCCTCGTCAGTAA 3033 0.362 MLPTFFIWFFSLLIFNFSPKTIAFTIGNQSDYLTLLKFKKFISNDPHRILDSWNGSIHFCNWYGITCNTMHQRVTELKLPGYKLHGSLSSHAANLTFLRHVNLADNKFSGKIPQELGQLLQLQELYLSNNSFSGEIPTNLTNCFNLKYLSLSGNNLIGKIPIEIGSLQKLQELNVGRNSLIGGVPPFIGNLSVLTTLSISRNNLEGDIPQEICRLKHLTKIALGLNKLSGTVPSCLYNMSSLAIFSSAANQIDGSLPPNMFNSLPNLKVFEIGVNQFSGLMPTSVANASTLRKLDISSNHFVGQVPNLGRLQYLWRLNLELNNFGENSTKDLIFLKSLTNCSKLQVCSISHNNFGGSLPNLAGNLSIQLSQLYLGSNQIYGQIPSELGNLNSLISLTMENNRFEGTIPDSFWKFQKIQVLDLSGNQLSGHIPGFIGNFSQMYYLSLAHNMLGGNIPPSFGNCHNLHHLNLSKNNFRGTIPLEVFSISSLSNSLDLSQNSLSGNLSVEVGRLKNINKLDFSENNLSGEIPITIDQCKSLEYLFLQGNSFHQIIPSSLAYIRGLRYLDMSRNQLSGSIPNILQNISRLEHLNVSFNMLDGEVPKEGVFRNASRLAVFGNNKLCGGISDLHLPPCPFKHNTHLIVVIVSVVAFIIMTMLILAIYYLMRKRNKKPSSDSPIIDQLAMVSYQDLYQATDGFSSRNLIGSGGFGSVYKGNLMSEDKVIAVKVLDLEKNGAHKSFITECNALKNIRHRNLVKILTCCSSIDYKGQEFKALVFEYMKNGSLENWLHSRMMNVEQPRALDLNQRLNIIIDVASALHYLHRECEQLVLHCDLKPSNVLIDEDNVAHVSDFGIARLVSSADGISPKETSTIGIKGTVGYAPPEYGMGSEVSTHGDMYSFGMLILEMITGRRPTDEMFLDGQNLHLYVENSFPNNVMQILDPHIVPREEEAAIEDRSKKNLISLIHKSLVSLFRIGLACSVESPTQRMNILDVTRELNMIRKVFLAGVHPRQ* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1058 1010 Pfam Leucine rich repeat 368 427 IPR001611 GO:0005515
Mtr5g1058 1010 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Mtr5g1058 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Mtr5g1058 1010 Gene3D Ribonuclease Inhibitor 329 640 IPR032675 -
Mtr5g1058 1010 Gene3D Ribonuclease Inhibitor 141 193 IPR032675 -
Mtr5g1058 1010 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Mtr5g1058 1010 PANTHER OS04G0122200 PROTEIN 18 1005 - -
Mtr5g1058 1010 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mtr5g1058 1010 SUPERFAMILY Protein kinase-like (PK-like) 669 995 IPR011009 -
Mtr5g1058 1010 PANTHER LRR RECEPTOR-LIKE KINASE 18 1005 - -
Mtr5g1058 1010 SMART LRR_typ_2 119 143 IPR003591 -
Mtr5g1058 1010 SMART LRR_typ_2 191 215 IPR003591 -
Mtr5g1058 1010 SMART LRR_typ_2 264 287 IPR003591 -
Mtr5g1058 1010 SMART LRR_typ_2 414 438 IPR003591 -
Mtr5g1058 1010 SMART LRR_typ_2 559 582 IPR003591 -
Mtr5g1058 1010 SMART LRR_typ_2 583 608 IPR003591 -
Mtr5g1058 1010 ProSiteProfiles Protein kinase domain profile. 696 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1058 1010 Gene3D Phosphorylase Kinase; domain 1 659 777 - -
Mtr5g1058 1010 Gene3D Transferase(Phosphotransferase) domain 1 778 1003 - -
Mtr5g1058 1010 Pfam Protein kinase domain 698 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1058 1010 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Mtr5g1058 1010 Gene3D Ribonuclease Inhibitor 194 328 IPR032675 -
Mtr5g1058 1010 SUPERFAMILY L domain-like 29 324 - -
Mtr5g1058 1010 SMART serkin_6 696 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1058 1010 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515
Mtr5g1058 1010 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515
Mtr5g1058 1010 Pfam Leucine Rich Repeat 145 165 IPR001611 GO:0005515
Mtr5g1058 1010 SUPERFAMILY L domain-like 337 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1058 Mtr-Chr5 10576762 10580789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1058 20 1002 Receptor kinase-like Gene Family AT3G47570 43.569 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1058 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1058 - - gmx:100801459 1248.42