Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1057 ATGGTAATGGTGGTCAACAAAATATCTGGTACATTTCCTTTGTGTCTTTACAATATGTCATCTCTTACTATGATCTCAGCTGCATCAAATCAGTTTGATGGCTCACTTCCATCCAACATGTTTAACACTCTCCCTTATCTTAAAGTATTTGCAATCAGTGGTAATCAAATTTCAGGTCTAATTCCCATTTCTGTTGAAAATGCTTCTACACTTGCAGAACTTGATATCAGTAATAACCTTTTTGTCGGAAATGTTCCAAGTCTAGGGAGGCTACATTATCTTTGGGGGCTAAATTTGGAAATAAATAATCTTGGTGACAATTCAACTAAGGATTTAGAATTTTTAAAACCATTGACAAATTGTAGTAATTTGCAAGCATTTTCTATATCCCATAATAATTTTGGAGGTAGTTTGCCAAGTTTCATAGGTAATTTTACCACCCAACTTAGTCGACTGTATTTTGCAAGCAATCAAATATCAGGGAAAATTCCTTTAGAAATAGGAAATCTAAATAGTTTAATTCTATTGAGAATGAAAAATAACTATTTTGAAGGGACGATTCCTTCAACTATTGGGAAGTTTCAAAAGATTCAAGTGCTAGATTTGTATGGAAATAAGCTGTCAGGAGAAATACCATCCTCTATAGGCAACCTTAGTCATCTGTATCATTTGAATTTAGGGAAAAATATGTTCGTAGGAAATATTCTGTCAAGTATAGGCAACTTGCAAAAGTTACAAATGTTATACCTTTCAAGAAACAACCTTAGAGGAGACATACCTTCAGAGGTTTTGAGTCTTTCATCTTTAACAACAGGATTGTTCTTATCCCAAAACTTTTTGAGTGGAAGTCTACCTGATGAAGTCGGTCAACTACAAAATATTGTGCGGATTGATGTCTCTAAAAATTGGTTGTCTGGTGAGATTCCTAGAACCTTGGGAGAATGCTTAAGCTTAGAATACCTTATTTTGACAGGGAATTCATTCAATGGAAGCATACCATCCTCTTTGGAATCTCTCAAAGGTCTTCGAGTGTTAGACCTCTCAAGAAACCAATTATCCGGATCAATTCCAAAAGTTTTGCAAAATATTTCTTCGATAGAATACTTCAATGCATCATTCAACATGCTGGAAGGAGAGGTACCAACTAAAGGTGTCTTTCGAAATGCCAGTGCAATGACAGTTATTGGAAACAATAAGCTTTGTGGAGGAATTTTAGAGTTGCATCTACCGCCATGCTCTAAACCTGCAAAACACCGTAACTTCAAGTTGATAGTAGGGATATGTAGCGCCGTTTCTCTTCTTTTCATTATGATATCCTTTCTAACTATCTATTGGAAAAGGGGAACGATACAAAATGCATCTTTGTTGGATTCACCAATAAAAGATCAGATGGTTAAGGTTTCGTACCAAAACCTACACCAAGCAACCAATGGGTTCTCGACAAGAAACTTGATAGGATCTGGATATTTTGGTTCTGTTTACAAAGGAACACTTGAGTCGGTGGGTGGAGATGTTGCCATAAAAGTCCTAAACCTTAAAAAGAAGGGAGTTCACAAGAGTTTCATTGCTGAATGTAATGCACTAAAAAATATTAGGCACAGAAATCTAGTTAAAATTTTGACTTGTTGTTCCAGCACAGATTACAAAGGAAGTGAGTTTAAAGCTCTTGTATTTGAGTACATGAGAAATGGAAACTTAGAAAATTGGTTGCATCCCACAACTGGAATTACAGATCAACCCATATCACTGACTCTTGAGCAAAGGTTAAATATTATTACTGATGTTGCGTCAGCATTTTGTTATCTTCATTACGAATGCGAGCAACCTGTCATTCACTGTGATTTAAAGCCTGAAAATATTCTTCTTAATGACATCATGGTAGCTCAAGTGAGTGATTTTGGGTTAGCAAAGTTGCTCTCAAGTGTTGGAGTCGCTCTGACGCAGAGTAGCACAATTGGAATAAAGGGGACAATTGGCTATGCACCTCCAGAGTATGGAATGGGTTTTGAGGTGTCAACTGAAGGTGACATGTATAGCTTTGGAATTCTGTTATTAGAAATGTTAACTGGAAGGAAACCCACAGATGAATTGTTTAAAGATGATCATAATCTCCATAATTATGTGAAACTTTCAATTCCAGACAACCTTTTCCATATTGTGGATCGATCTATTATCATCGAATCAGAACACAATACTGACAATGGTAATACTGGCAGTATACATCCTAATGTAGAGAAATGTTTACTTTCACTTCTTAGGATTGCACTTTCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAATATGGTTGATGTAATAAGGGAGCTCAATATCATAAAAAGTTTCTTTCCTGCCGAGGTTCAACAAAGGCGAGGTGCATCACAGCCACAAATCACATGA 2400 0.3613 MVMVVNKISGTFPLCLYNMSSLTMISAASNQFDGSLPSNMFNTLPYLKVFAISGNQISGLIPISVENASTLAELDISNNLFVGNVPSLGRLHYLWGLNLEINNLGDNSTKDLEFLKPLTNCSNLQAFSISHNNFGGSLPSFIGNFTTQLSRLYFASNQISGKIPLEIGNLNSLILLRMKNNYFEGTIPSTIGKFQKIQVLDLYGNKLSGEIPSSIGNLSHLYHLNLGKNMFVGNILSSIGNLQKLQMLYLSRNNLRGDIPSEVLSLSSLTTGLFLSQNFLSGSLPDEVGQLQNIVRIDVSKNWLSGEIPRTLGECLSLEYLILTGNSFNGSIPSSLESLKGLRVLDLSRNQLSGSIPKVLQNISSIEYFNASFNMLEGEVPTKGVFRNASAMTVIGNNKLCGGILELHLPPCSKPAKHRNFKLIVGICSAVSLLFIMISFLTIYWKRGTIQNASLLDSPIKDQMVKVSYQNLHQATNGFSTRNLIGSGYFGSVYKGTLESVGGDVAIKVLNLKKKGVHKSFIAECNALKNIRHRNLVKILTCCSSTDYKGSEFKALVFEYMRNGNLENWLHPTTGITDQPISLTLEQRLNIITDVASAFCYLHYECEQPVIHCDLKPENILLNDIMVAQVSDFGLAKLLSSVGVALTQSSTIGIKGTIGYAPPEYGMGFEVSTEGDMYSFGILLLEMLTGRKPTDELFKDDHNLHNYVKLSIPDNLFHIVDRSIIIESEHNTDNGNTGSIHPNVEKCLLSLLRIALSCSVESPKERMNMVDVIRELNIIKSFFPAEVQQRRGASQPQIT* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1057 799 SUPERFAMILY Protein kinase-like (PK-like) 460 778 IPR011009 -
Mtr5g1057 799 Pfam Protein kinase domain 481 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1057 799 PANTHER LRR RECEPTOR-LIKE KINASE 3 787 - -
Mtr5g1057 799 Gene3D Transferase(Phosphotransferase) domain 1 561 792 - -
Mtr5g1057 799 SMART LRR_typ_2 194 218 IPR003591 -
Mtr5g1057 799 SMART LRR_typ_2 242 266 IPR003591 -
Mtr5g1057 799 SMART LRR_typ_2 339 362 IPR003591 -
Mtr5g1057 799 Gene3D Phosphorylase Kinase; domain 1 443 560 - -
Mtr5g1057 799 SMART LRR_sd22_2 194 220 - -
Mtr5g1057 799 SMART LRR_sd22_2 242 271 - -
Mtr5g1057 799 SMART LRR_sd22_2 146 172 - -
Mtr5g1057 799 SMART LRR_sd22_2 339 365 - -
Mtr5g1057 799 PANTHER OS04G0122200 PROTEIN 3 787 - -
Mtr5g1057 799 SMART serkin_6 479 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1057 799 ProSiteProfiles Protein kinase domain profile. 479 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1057 799 SUPERFAMILY L domain-like 6 212 - -
Mtr5g1057 799 Gene3D Ribonuclease Inhibitor 3 117 IPR032675 -
Mtr5g1057 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Mtr5g1057 799 Gene3D Ribonuclease Inhibitor 118 414 IPR032675 -
Mtr5g1057 799 SUPERFAMILY L domain-like 147 402 - -
Mtr5g1057 799 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Mtr5g1057 799 ProSitePatterns Protein kinases ATP-binding region signature. 485 508 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1057 Mtr-Chr5 10568900 10572565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1057 3 791 Receptor kinase-like Gene Family AT3G47570 43.672 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1057 Pkinase 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1057 - - gmx:100792724 1007.28