Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1036 ATGCCACAAAATTGCATAGCACCAAAGCCAGAATACTTTAATAGTACTCTCTCTTTGGAAGGATCACCACACATGACTGATCCTCATAGCTCAAACAATGAACAATCATTACCAAAACTCATTATGTATCCCATAACTTTAAAGTTTGAGGATTTGGTATACAAAGTGAAAGTAAACCAAAAAGAGAAGACTATACTGAATGGAATCACAGGTGTGGTGTGTCCAGGAGAAATACTAGCTATGTTAGGGCCATCAGGCAGTGGCAAAACAACACTCCTAACAGCACTCGGAGGCCGTCTCAACGGCAAACTAACCGGAAAAACCACTTACAACAATCAACCTTTCTCGGGTTCAATAAAAAGAAGAACAGGTTTTGTAGCTCAAGATGATGTTCTTTACCCTCACTTAACCGTTACCGAAACACTAGTGTTCACTGCACTTTTGAGGCTTCCTAAAACCTTAACAAGAGATGAAAAAGTTGTGCATGTAGAGAGAGTGATTTCTGAGTTAGGACTAAATAATTGTAGGAATAGTATGATTGGAGGACCACTTTTGAGAGGTATATCAGGTGGTGAGAAAAGGAGAGTGAGTATAGGACAAGAAATGCTTATAAATCCAAGCCTTTTGTTGCTTGATGAACCTACTTCTGGTTTGGATTCTACCACTGCTTTGAGAATCTTAAACACTATCAAAAAACTTGCTAGTGGTGGTAGAACTGTTGTTACAACCATTCATCAACCTTCAAGTAGACTCTACTATATGTTTGATAAGGTTGTGTTGCTATCTGAAGGGTGTCCTATCTATTATGGTCCTGCTTCAACTGCTCTTGAATATTTCTCATCTGTTGGTTTTTCCACTTCCGTGACTGTTAATCCAGCTGATCTTTTGCTTGATCTTGCCAATGGTATTGCACCAGACTCTAAGCATGTAACTGAACAAAGTGAGGCCTTGGAACATGAGAGGAAGACTGTGAGAGAATCTCTAATTTCAGCTTATGACAAAAACATAGCTCCAAGGCTAAAAGCCGAGGTTTCTAGCATGGAGGTGAACAACTTCAACAACATCACAAAAGATTCTTGCACAAGGAATCAAATAAATCCAGAACAATGGTGTACAAGCTGGTGGTATCAATTCACTGTACTATTACAAAGGGGTGTTAGGGAAAGAAGGCATGAAGCATTCAATAGGCTGAGAATATTCCAAGTCATAAGTGTAGCTTTTCTAGCTGGACTTTTGTGGTGGCATACACCAGCATCACACCTTGAAGATAGGACAGCTTTGCTATTTTTCTTTGCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCACAAGAAAGAAGAATGCTAATCAAGGAACGATCCTCAGGAATGTACCGTCTTTCATCGTACTTTCTAGCACGAACAATAGGAGACTTGCCACTAGAGCTAGCACTACCAACAGCATTTGTCATCATATTATATTGGATGGGAGGACTTAAACCTGATCCTGTCACTTTCATCCTTTCACTTCTTGTAGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTTGGATTAGCATTTGGTGCTATTTTGATGGAGATTAAACAAGCAACTACACTAGCTTCTGTGACAACACTTGTTTTTCTCATTGCTGGAGGATACTATATACAACAGATTCCACCTTTCATAGTTTGGCTTAAGTACTTAAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGTGTTCAATACAATGAAAATGATTACTATGAATGTTCAAAGGGAGAGTTGTGCAAGGTTATGGACTTTCCTCCAATTAAATCAATGGGATTGAATCATATGTGGGTTGATGTGTTCATCATGGCCTTGATGTTGTTTGGTTATAGATTAGTTGCTTACTTAGCACTTCGTAGGGTTAGGTAA 1917 0.3907 MPQNCIAPKPEYFNSTLSLEGSPHMTDPHSSNNEQSLPKLIMYPITLKFEDLVYKVKVNQKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLTGKTTYNNQPFSGSIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPKTLTRDEKVVHVERVISELGLNNCRNSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKKLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTSVTVNPADLLLDLANGIAPDSKHVTEQSEALEHERKTVRESLISAYDKNIAPRLKAEVSSMEVNNFNNITKDSCTRNQINPEQWCTSWWYQFTVLLQRGVRERRHEAFNRLRIFQVISVAFLAGLLWWHTPASHLEDRTALLFFFAVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVIILYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKVMDFPPIKSMGLNHMWVDVFIMALMLFGYRLVAYLALRRVR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1036 638 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524
Mtr5g1036 638 CDD ABCG_EPDR 44 270 - -
Mtr5g1036 638 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 288 IPR003439 GO:0005524
Mtr5g1036 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 636 - -
Mtr5g1036 638 Pfam ABC-2 type transporter 245 319 IPR043926 GO:0140359
Mtr5g1036 638 Pfam ABC transporter 67 216 IPR003439 GO:0005524
Mtr5g1036 638 Gene3D - 46 283 IPR027417 -
Mtr5g1036 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 281 IPR027417 -
Mtr5g1036 638 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 21 636 - -
Mtr5g1036 638 SMART AAA_5 75 265 IPR003593 -
Mtr5g1036 638 Pfam ABC-2 type transporter 376 582 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1036 Mtr-Chr5 10357525 10360283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1036 45 264 Calmodulin-binding Proteins AT2G36910 27.232 1.01e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1036 K05681 - gmx:100780191 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1036 5 10357525 10360283 Mtr5g1036 5 10357525 10360283 ECH