Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1034 ATGGCAACAATGGGTGGTGAGACTTTGATGAAGGCCCATCTAGCCATGGCATTCTTACAGCTTTTCAATGGTGGATACCATGTCATTACTAAGGTGGCCCTTAACGCTGGAGTCAACCAATTAGTCTTCTGCTTCTATAGAGATCTCATTGCCCTCCTCATTATTTCTCCCATTGCTTTCTTCAAAGAAAGACAGACAAGACCACCCATTACTAAGCAGCTATTCATGTCATTCTTCTTTCTTGGATTAATTGGGATATTTGGCAGCCAGGTGTTGTTTCTTTATGGTTTAGGTTATACAAATCCAACTTATGCCTCTGCCTTACAGCCTTCTATTCCTGTCTTTACCTTTCTACTTGCTGTCATCATGGGTGTAGAAAGAGTGAATCTGCAGAGTTTTGAAGGTCTGACAAAGGTTGGAGGGACTGTTATATGTGTTTCTGGTGCCATATTTATGGCTTTGTACCGCGGTCCATCGTTGATAGGATATAACGAACCAGTGATCATACCACATAATGAAATAATTGTCAGTGGTCAGCCAGAGCCTTTTGGTTTTGGATGGTTGATTACTGGTTTACTGAATCTTGGATTAGAAAATTTCAAACTTGGAGTTATGTTCTTGATAGGTAACTGCACATTCATGGCTGCTTTCCTAGCCATTCAGGCGCAGGTACTAAAAAAGTATCCTGCATATCTATCAGTGACAGCATTTTCATTCTTCTTTGGCGTTGTACTAATGGCGATAGTCTCCTTATTCACGACTAATTTGTCATCTGACTGGATTTTGACACAATCAGAAATACTTGCGGTTGTTTATGCTGGAACTATTACATCTGCCATTAATTATGCAGTCATGTGTTGGAGCAACAAGATATTAGGGCCAACTCTGGTTGCCCTTTACATTCCACTTCAACCTGGATTTGCTGCCATATTGTCTCAGATATTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGGTCTTTGATCATTGCTGGTCTCTTTGGTGTTACCTGGGCATCTTATAAAGAAAGACAGGCAACTCTTGAAATTTCTTCTCATGACTCTTGGGTTTCTGAACCACTTATTCATGAAAAAAGTGCACACCAAAGAGATCATATATTTCCGGGGTCCTCCAGTGCATCCACAGCCGCAAGATCATGTGGTTAA 1173 0.4101 MATMGGETLMKAHLAMAFLQLFNGGYHVITKVALNAGVNQLVFCFYRDLIALLIISPIAFFKERQTRPPITKQLFMSFFFLGLIGIFGSQVLFLYGLGYTNPTYASALQPSIPVFTFLLAVIMGVERVNLQSFEGLTKVGGTVICVSGAIFMALYRGPSLIGYNEPVIIPHNEIIVSGQPEPFGFGWLITGLLNLGLENFKLGVMFLIGNCTFMAAFLAIQAQVLKKYPAYLSVTAFSFFFGVVLMAIVSLFTTNLSSDWILTQSEILAVVYAGTITSAINYAVMCWSNKILGPTLVALYIPLQPGFAAILSQIFLGSPIYLGSIIGGSLIIAGLFGVTWASYKERQATLEISSHDSWVSEPLIHEKSAHQRDHIFPGSSSASTAARSCG* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1034 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Mtr5g1034 390 Pfam EamA-like transporter family 14 137 IPR000620 GO:0016020|GO:0016021
Mtr5g1034 390 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020|GO:0016021
Mtr5g1034 390 PANTHER WAT1-RELATED PROTEIN 11 381 IPR030184 GO:0016021|GO:0022857
Mtr5g1034 390 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 11 381 - -
Mtr5g1034 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1034 Mtr-Chr5 10321026 10324946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1034 96 371 Nodulin-like Gene Family AT5G45370 58.571 2.34e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1034 - - mtr:MTR_5g025330 561.992