Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1032 ATGGCAACAATGGGAAGTGAAGCATGGAAGGCCCATTTGGGCATGGCAGTTGTACAGCTATTCAATGGTGGCTACCATGTCATTACTAAGGTGGCCCTTAATGCTGGAGTCAACCAATTAGTCTTCTGCTTCTATAGGGATCTCCTTGCTCTCTTTGCTCTTTCTCCCATCGCTTTCTTCCATGAAAGACAGACAAGGCCACCCATTACTAAGCAGCTATTGATGTCATTCTTCTTTCTTGGATTAACCGGGATATTTGGCAACCAGCTGTTGTTTCTTATTGGTTTAGGTTATACAAATCCAACTTATGCAGCTGCCTTACAGCCTGCTGTTCCAGTCTTTACCTTTCTGCTTGCTGTGATCATGCGTGTAGAAAGAGTGAATTTGCAGAGTATTGAAGGTCTGACAAAGGTTGGAGGGACTCTTATATGTGTTTCAGGTGCCATATTTATGGTTTTGTATCGTGGTCCATCGGTGATAGGATATACCGAACCAGTCATTATACCACAGAATGAAATAATCGTCAGTGGTCAGCCAGAGCCTTCTGCATGGTTGATTACTGGTTTACAGAATCTTGGATTGGATAATTTTGAACTTGGAGTTGTGTTCTTGATAGGCAACTGCACGTGCATGGCTGCTTTCTTAGCGATTCAGGCACCGGTACTAAAAAAGTATCCTGCAAATCTATCTGTGACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGTTATTCATGACTGATTTGTCAAGTGATTGGATTTTGACAGAATCAGAAATACTTGCTGTTGTTTATGCTGGAATTATTACATCTGCATTTAGTTATGGAGTCATCAGTTGGAGCAACAAGATATTAGGGCCAACTCTGGTTGCCCTTTACGTTCCACTTCAACCCGCATTTGCTGCCATATTGTCTCAGATATTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGGTGTTTGATCATTGCTGGTCTGTATACTGTTACCTGGACATCTTATAAAGAAAGGCGGGCAATTGTTGGAATTACTTCTCATGTCTCTGGGACCTCTGAACCACTTATTATTCAGGAAAAAAGTGCACACCATAGAGGTGATATATTTCCAGGGTCCTCCAGGTCCCCAAACCCAAAATCATATGATTGA 1164 0.4201 MATMGSEAWKAHLGMAVVQLFNGGYHVITKVALNAGVNQLVFCFYRDLLALFALSPIAFFHERQTRPPITKQLLMSFFFLGLTGIFGNQLLFLIGLGYTNPTYAAALQPAVPVFTFLLAVIMRVERVNLQSIEGLTKVGGTLICVSGAIFMVLYRGPSVIGYTEPVIIPQNEIIVSGQPEPSAWLITGLQNLGLDNFELGVVFLIGNCTCMAAFLAIQAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTESEILAVVYAGIITSAFSYGVISWSNKILGPTLVALYVPLQPAFAAILSQIFLGSPIYLGSIIGGCLIIAGLYTVTWTSYKERRAIVGITSHVSGTSEPLIIQEKSAHHRGDIFPGSSRSPNPKSYD* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1032 387 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 10 379 - -
Mtr5g1032 387 Pfam EamA-like transporter family 12 135 IPR000620 GO:0016020|GO:0016021
Mtr5g1032 387 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020|GO:0016021
Mtr5g1032 387 PANTHER WAT1-RELATED PROTEIN 10 379 IPR030184 GO:0016021|GO:0022857
Mtr5g1032 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Mtr5g1032 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1032 Mtr-Chr5 10304706 10308969 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1032 2 270 Nodulin-like Gene Family AT3G45870 64.312 9.36e-114 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1032 - - mtr:MTR_5g025330 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1032 5 10304706 10308969 Mtr5g1032 5 10304706 10308969 ECH