Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1030 ATGGCAATGGGAGGTGACATGTGGAAGGCTCATATGAGCATGGCTTTGGTGCAGTTATTATATGGTGGCTACCATGTCATCACCAAAGTTGCCCTTAATGTTGGAGTCAACCAACTTGTCTTCTGCTTCTATAGAGATCTCCTTGCTCTCTTCATTATTTCTCCCATTGCTTTCTTCAAAGAGAGACAGACAAGGCCACCTATTACTAAGAAGCTATTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCAGCTCCTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCCGCTGCGTTACAGCCTGCTATTCCTGTCTTTACCTTCCTCTTTGCTGTAATCATCGGTGTAGAAAGAGTGAACTTGAAGAGTTCTGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATATGTGTCTCGGGTGCTGTATTGATGGTTTTGTATCGCGGTCCATCGTTGATAGGATATACTGAACTGGTCGTTATACCACAGAATGACATAAGTGTCGGTGGTCAGCCAGAGCCTTCTGGATGGTTGATCAGTGGTTTACAGAATCTTGGATTAGATAATTTTGAACTTGGAGTTGTGTTCTTGATAGGGAACACTATGTGCATGGCTGCTTTCCTAACCATTCTGGCGCCTGTATTAAAAAAGTATCCTGCAAATCTATCTGTAACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGCTATTCATGACTGATCTGTCAAGTGACTGGATTTTGACACAACCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTGCTTCTGCCTTTAACTATGCAGTCATTAGTTGGTGCAACAAGATATTGGGGCCAGCTTTAGTTTCCCTTTACAATCCACTTCAACCTGGATTTTCTGCCCTCTTGTCTCAGATTTTTCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCATTTATCATTGCTGGTCTATATACGGTTACTTGGGGATCATATAGAGAAAGACATGCAACAGTTGGAGTTATTCCTCATGGATGGGAAGCTGAACCACTCATCCATGATAAGATAGGTCAAATTTTTTCAGGGTCCTCTAGTCTATCTGCAAGTCCAAAGTCAGCAGCTGATTAA 1149 0.4125 MAMGGDMWKAHMSMALVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERQTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIIGVERVNLKSSEGLAKVGGTLICVSGAVLMVLYRGPSLIGYTELVVIPQNDISVGGQPEPSGWLISGLQNLGLDNFELGVVFLIGNTMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTQPEILAVVYAGTIASAFNYAVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWGSYRERHATVGVIPHGWEAEPLIHDKIGQIFSGSSSLSASPKSAAD* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1030 382 PANTHER WAT1-RELATED PROTEIN 9 364 IPR030184 GO:0016021|GO:0022857
Mtr5g1030 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Mtr5g1030 382 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 9 364 - -
Mtr5g1030 382 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Mtr5g1030 382 Pfam EamA-like transporter family 198 335 IPR000620 GO:0016020|GO:0016021
Mtr5g1030 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1030 Mtr-Chr5 10283297 10288438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1030 6 269 Nodulin-like Gene Family AT3G45870 63.258 3.36e-108 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1030 - - mtr:MTR_5g025330 671.774