LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g1030	ATGGCAATGGGAGGTGACATGTGGAAGGCTCATATGAGCATGGCTTTGGTGCAGTTATTATATGGTGGCTACCATGTCATCACCAAAGTTGCCCTTAATGTTGGAGTCAACCAACTTGTCTTCTGCTTCTATAGAGATCTCCTTGCTCTCTTCATTATTTCTCCCATTGCTTTCTTCAAAGAGAGACAGACAAGGCCACCTATTACTAAGAAGCTATTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCAGCTCCTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCCGCTGCGTTACAGCCTGCTATTCCTGTCTTTACCTTCCTCTTTGCTGTAATCATCGGTGTAGAAAGAGTGAACTTGAAGAGTTCTGAAGGTCTGGCAAAGGTTGGAGGAACTCTTATATGTGTCTCGGGTGCTGTATTGATGGTTTTGTATCGCGGTCCATCGTTGATAGGATATACTGAACTGGTCGTTATACCACAGAATGACATAAGTGTCGGTGGTCAGCCAGAGCCTTCTGGATGGTTGATCAGTGGTTTACAGAATCTTGGATTAGATAATTTTGAACTTGGAGTTGTGTTCTTGATAGGGAACACTATGTGCATGGCTGCTTTCCTAACCATTCTGGCGCCTGTATTAAAAAAGTATCCTGCAAATCTATCTGTAACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGCTATTCATGACTGATCTGTCAAGTGACTGGATTTTGACACAACCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTGCTTCTGCCTTTAACTATGCAGTCATTAGTTGGTGCAACAAGATATTGGGGCCAGCTTTAGTTTCCCTTTACAATCCACTTCAACCTGGATTTTCTGCCCTCTTGTCTCAGATTTTTCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCATTTATCATTGCTGGTCTATATACGGTTACTTGGGGATCATATAGAGAAAGACATGCAACAGTTGGAGTTATTCCTCATGGATGGGAAGCTGAACCACTCATCCATGATAAGATAGGTCAAATTTTTTCAGGGTCCTCTAGTCTATCTGCAAGTCCAAAGTCAGCAGCTGATTAA	1149	0.4125	MAMGGDMWKAHMSMALVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERQTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIIGVERVNLKSSEGLAKVGGTLICVSGAVLMVLYRGPSLIGYTELVVIPQNDISVGGQPEPSGWLISGLQNLGLDNFELGVVFLIGNTMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTQPEILAVVYAGTIASAFNYAVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWGSYRERHATVGVIPHGWEAEPLIHDKIGQIFSGSSSLSASPKSAAD*	383

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g1030	382	PANTHER	WAT1-RELATED PROTEIN	9	364	IPR030184	GO:0016021\|GO:0022857
	Mtr5g1030	382	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	44	154	-	-
	Mtr5g1030	382	PANTHER	NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN	9	364	-	-
	Mtr5g1030	382	Pfam	EamA-like transporter family	11	150	IPR000620	GO:0016020\|GO:0016021
	Mtr5g1030	382	Pfam	EamA-like transporter family	198	335	IPR000620	GO:0016020\|GO:0016021
	Mtr5g1030	382	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	235	341	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g1030	Mtr-Chr5	10283297	10288438	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr5g1030	6	269	Nodulin-like Gene Family	AT3G45870	63.258	3.36e-108	317

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g1030	-		-	mtr:MTR_5g025330	671.774

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