Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1021 ATGAAAAAAAGAAACCAAAATCCATCTTTTGATTCACCAACAATCGATCAACTAGCTAAAGTTTCATACCAAGACTTACATCAAGGAACTGATGGGTTCTCGGATAAAAACTTGATTGGATCAGGAAGTTTTGGTTGTGTGTATAGCGGGAATCTTGTGTCAGAAGTTAATGTTGTTGCTGTGAAGGTCCTAAACCTCCAAAAGAATGGAGCTAGCAAGAGTTTTATTGTTGAATGTAATGCACTCAAAAACATTAGACACCGAAACTCAGTTAAGGTTTTAACATGTTGTTCTAGTACAAACTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTTATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATTCAGAGCATCCAAAAACATTGGACCTTGGTCATAGGTTAAACATCATTATCGATGTTGCTTCGGCATTACATTATCTGCATCAAGAATGTGAGCAATTGATTATTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTGAATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAACATTTGTCTCAACCATTGGTGGTACCTCTCAACCGTTGGCTACACTCCTCCAGGTTCTCAGAATGCCTGTTATTTATCTGCTTATCCTGAACCCATCCTTCACCATTCTATCATCACCATCTTTGTCTCCTAATGATTTTTCCAGTGAAATGTTGAAGATGTTGAGTCTGAAAGATATTAAAGGAATGGTGGCTAAGGGAATATGCATCACAAGGTCCAGGAGTTTCATACAGCCAGATGTATCAAATTGCTCTGTGGTGTATCCTCTTAGATGTAAGACAAATTAA 858 0.3706 MKKRNQNPSFDSPTIDQLAKVSYQDLHQGTDGFSDKNLIGSGSFGCVYSGNLVSEVNVVAVKVLNLQKNGASKSFIVECNALKNIRHRNSVKVLTCCSSTNYKGQEFKALVFYYMKNGSLEQWLHPEILNSEHPKTLDLGHRLNIIIDVASALHYLHQECEQLIIHCDLKPSNVLLNDDMVAHVSDFGIATFVSTIGGTSQPLATLLQVLRMPVIYLLILNPSFTILSSPSLSPNDFSSEMLKMLSLKDIKGMVAKGICITRSRSFIQPDVSNCSVVYPLRCKTN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1021 285 PANTHER OS04G0122200 PROTEIN 1 198 - -
Mtr5g1021 285 SUPERFAMILY Protein kinase-like (PK-like) 6 197 IPR011009 -
Mtr5g1021 285 Gene3D Phosphorylase Kinase; domain 1 14 114 - -
Mtr5g1021 285 Gene3D Transferase(Phosphotransferase) domain 1 115 211 - -
Mtr5g1021 285 Pfam Protein kinase domain 34 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1021 285 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Mtr5g1021 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Mtr5g1021 285 SMART serkin_6 33 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1021 285 PANTHER LRR RECEPTOR-LIKE KINASE 1 198 - -
Mtr5g1021 285 ProSiteProfiles Protein kinase domain profile. 33 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1021 Mtr-Chr5 10236486 10237516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1021 1 193 Receptor kinase-like Gene Family AT3G47570 55.779 2.88e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g1021 Pkinase 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1021 - - mtr:MTR_5g025180 569.696