Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1014 ATGCTTTCCATTCAGTGTCGCCGCCGGCACAAGTCCGACATGGCTTACCTCACCGCCCTCATCGGCATTCTTCTCCTCTTCCCGGCAGCAACCTCCCAAGCTCAAAACCTCAAAAAAGAAACTCACTCTTTTGGATTCTTCAACGCCACCAATGAACACTATTTTCAAACTTTATCCACCGCAACCATCCATTTCAACGCCCTTCAGGTCACCCCGGACAGCGCTGGAAGTTCAAACATCGTTCCCCTTTTCAACAACTCCGGCAGAGTCTTTTACAAAGAACCCTTTAAACTCTGGGATGGCTCTTCCTCCACCGGAAAACTTGTCTCCTTCAATACTTCATTTCTCATCAACATCTATCGCTACAACAACGGTACTCCTGGCGAAGGTATCGCTTTCATCATCGCACCTTCTCTCTCCATTCCTCTCAACAGCTCCGGTGGTTACCTAGGGTTAACAAACGCCACCACAGACGGAAACGTCAACAACCGTTTTGTCGCTGTTGAACTTGACACGGTTAAACAAGACTTTGATGATGACAAAAACCACATAGGACTTGACATAAATAGCGTCCGTTCCAACGTTAGTGTTCCTCTTGATTTGGAACTCTCTCCGATCGGAACTAGATTCCATGTTTTATGGGTTGAATACGACGGTGACCGGAAAAATCTTAGTATCTACATGGCGGAACAACCTTCACAAGATTTACCTATAGTGAAAAAACCGGCTAAACCGATTATAAGTTCTGTTCTTGATCTAAGACAAGTGGTGAGTCAAAATTCTTATTTTGGATTTTCTGCTTCAACGGGTATCACTGTTGAGTTAAACTGTGTACTTAGATGGAATATTTCAATGGAAGTGTTTGATAATAATAAAAATGAAAAAAATTTGAGTATTGGTTTAGGTGTTGGGATTCCAGTATTGGTTTTGATTTTAGCTGGTGGTGGATTTTGGTATTATTATTTATGTAAGAAGAAGAAGAGTGATGAACATGGTTCAACTTCTCAAATAATGGGTACATTGAAGAGTTTACCAGGTACACCAAGAGAGTTTAGTTTTCAAGAATTGAAGAAAGCTACAAATAATTTTGATGAAAAGCATAAACTTGGACAAGGTGGATATGGTGTTGTTTATAGAGGAACTTTACCTAAGGAGAAATTAGAAGTTGCTGTTAAGATGTTTTCTAGAGATAAGATGAAAAGTACTGATGATTTCTTGGCTGAACTTACTATTATCAATCGTCTTCGTCATAAACATCTTGTTAAGTTACAAGGATGGTGCCACAAAAATGGAGTATTGCTCTTAGTATACGACTACATGCCTAACGGAAGCTTAGACAACCACATATTTTGCGAGGAAGGAACAAGCACAACCCCACTAAGTTGGAATCTAAGGTATAAAATCCTCTCAGGAGTCGCTTCTGCATTGAATTACCTACACAACGAGTACGATCAAACTGTAGTCCACAGAGACCTGAAAGCAAGCAACATAATGCTAGACGTTGATTTCAATGCACGTTTAGGTGATTTCGGCTTAGCACGTGCACTAGAGAATGAAAAAACATCGTATGCAGAATTAGAAGGAGTACAAGGTACAATGGGATACATAGCACCGGAATGTTTCCACACAGGAAAAGCTTCAAGAGAATCAGATGTATATGGACTTGGTGCTGTGTTTCTTGAAACAGTTTGTGGTCAAAGACCTTGGACTAAAATTGAAGGGTACCAATTTTTGGTTGATTGGGTTTGGTATTTACATCGTGAAGGAAGGATTTTAGAAGCAGTTGATCAAAGTGTTGGGAATGAGTATGATGTTGAAGAGGTAGAGAGGGTATTGAAATTGGGATTGGCTTGTTCTCATCCTATTGCTAGTGAAAGACCAAATTTGCAAATGATTGTTCAGATTTTATCTGGGTCTGTTAATGTGCCTCATGTTCCACCTTTTAAACCTTCTTTTATGTGGCCAGCTGTGGATTTAGCTAGTCTTGCAAGTACTGATTTTACAACAACAAATACTAGTGAGTACACACCAATCAATACTAGTAACTCACAATCTTCTATGCATGTTGGATTCTCAGATAACAGTTCTTTGGTCTAA 2097 0.3991 MLSIQCRRRHKSDMAYLTALIGILLLFPAATSQAQNLKKETHSFGFFNATNEHYFQTLSTATIHFNALQVTPDSAGSSNIVPLFNNSGRVFYKEPFKLWDGSSSTGKLVSFNTSFLINIYRYNNGTPGEGIAFIIAPSLSIPLNSSGGYLGLTNATTDGNVNNRFVAVELDTVKQDFDDDKNHIGLDINSVRSNVSVPLDLELSPIGTRFHVLWVEYDGDRKNLSIYMAEQPSQDLPIVKKPAKPIISSVLDLRQVVSQNSYFGFSASTGITVELNCVLRWNISMEVFDNNKNEKNLSIGLGVGIPVLVLILAGGGFWYYYLCKKKKSDEHGSTSQIMGTLKSLPGTPREFSFQELKKATNNFDEKHKLGQGGYGVVYRGTLPKEKLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHKNGVLLLVYDYMPNGSLDNHIFCEEGTSTTPLSWNLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDVDFNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGKASRESDVYGLGAVFLETVCGQRPWTKIEGYQFLVDWVWYLHREGRILEAVDQSVGNEYDVEEVERVLKLGLACSHPIASERPNLQMIVQILSGSVNVPHVPPFKPSFMWPAVDLASLASTDFTTTNTSEYTPINTSNSQSSMHVGFSDNSSLV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1014 698 ProSitePatterns Legume lectins beta-chain signature. 166 172 IPR019825 -
Mtr5g1014 698 Gene3D - 40 301 - -
Mtr5g1014 698 SMART serkin_6 363 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1014 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Mtr5g1014 698 Pfam Legume lectin domain 44 296 IPR001220 GO:0030246
Mtr5g1014 698 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Mtr5g1014 698 PANTHER - 23 665 - -
Mtr5g1014 698 CDD lectin_legume_LecRK_Arcelin_ConA 43 285 IPR001220 GO:0030246
Mtr5g1014 698 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Mtr5g1014 698 Pfam Protein kinase domain 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1014 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 292 IPR013320 -
Mtr5g1014 698 MobiDBLite consensus disorder prediction 675 698 - -
Mtr5g1014 698 Gene3D Transferase(Phosphotransferase) domain 1 440 643 - -
Mtr5g1014 698 ProSiteProfiles Protein kinase domain profile. 363 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1014 698 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 23 665 - -
Mtr5g1014 698 SUPERFAMILY Protein kinase-like (PK-like) 345 669 IPR011009 -
Mtr5g1014 698 PIRSF SRK 247 690 IPR024171 GO:0004674
Mtr5g1014 698 PIRSF SRK 29 72 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1014 Mtr-Chr5 10148133 10152097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1014 86 652 Receptor kinase-like Gene Family AT5G55830 38.742 1.02e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr5g1014 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1014 - - gmx:100780014 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1014 5 10148133 10152097 Mtr5g1014 5 10148133 10152097 ECH