Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0993 ATGAAGCATTTTTCTTTCTTCTTACCTATATTTTGGTATTTATACCTTCATCTCCTTCTTCTAGTTCTTCCTTTGAACTTAACTTGGTTTTGCCCAAACAGAACTGTAGCAATAGCAGAGGCCTTGGCATTAGGAAACCAAACTGATCATCTTGCATTGCTCCAATTCAAAGAATCAATATCCAGTGACCCAAATGGAGTCTTAGATTCTTGGAATTCTTCTATCCACTTCTGCAACTGGCATGGAATCACATGCAACCCCATGCATCAAAGAGTTACAAAATTGAACTTACAAGGATACAAGTTGCATGGATCCATGTCACCTTACATTGGCAATCTCTCTCGTATAAGAAACATCAACCTTAAAAACAATACCTTCTTTGGAAAAATTCCACAGGAACTCGGTCGGTTGTTACATCTGCATCAACTTTTGCTCGACAATAACTTGTTTTCAGGAGAAATTCCTATAAACTTGACAAGTTGTTCGAATCTTAAAGTTTTGCACTTATTTGGAAACAATCTAACTGGCAAAATACCAGCTGAAATTGGTTCTCTTCAAAAACTTATTATAGTGAACATTGGAAAAAACAATTTAACAGGAGGAATCTCGCCATTCATAGGTAACCTTTCTTCCTTGATAAGTTTTGGGGTTGTTTATAATAATTTAGAGGGAGATATTCCACGAGAAATATGTCGCCTAAAAAACTTGATAATAATAACAGTGACTGACAACAAACTATCAGGTACATTTCCACCTTGTCTCTACAATATGTCATCTCTTACATTGATCTCAACAGCAGATAATCACTTTAGTGGCTCTCTTCCATCAAATATGTTCCAAACTCTCCCTAATCTCCGATCTTTTGAAATAGGAGGGAATAAAATCTTAGGTTCAATCCCAACTTCCATTGTAAATGCTTCTACTTTGACATCATTTGACATTAGTGGAAACCATTTTGTTGGACAAGTTCCAAGTCTAGGGAAGCTACAAGATCTTAATTTGCTAAATCTTGAAATGAACATTCTAGGTGACAATTCAACTAAGGATTTAGGGTTTTTGAAAACTATGACAAATTGTAGTAACTTACAAGTGCTTAGTTTAGCTGCTAATAATTTTGGAGGTTGCCTGCCAAATTCCGTGGGCAATTTATCCTTCCAACTTAGTGAACTATACCTTGGGGGTAATGAGATATCAGGAAAAATTCCAGAAGAGTTAGGAAATCTAGTAAACTTAACTCTCTTGAGCATGGGACATAACCACTTTGAAGGAATTATCCCGGCTAATTTTGGAAAGTTCCAAAGCATGCAAAGGTTAGATTTGCGTCAAAACAAGTTATCAGGAGATATACCATATTTCATAGGCAACCTCAGTCAGCTGTTTGATTTGCATATGGAAGAAAACATGTTAGAAGGAAATATTCCTTTGAGTATTGGGGAATGCCAAATGTTACAATATCTAAACCTTTCGCAAAACAACCTTCAAGGAGCCATACCCTTAGAAATTTTTAGTATTTTTTCCTTAACAACGGGATTGGACTTATCACAAAATTCATTGAGTGGTAGTTTACCTGATGAAGTGGGTTTGCTAAAAAATATTCATAAGCTAGATGTCTCTGAAAATCATCTGTCGGGTGACATTCCAATAACAATTGGTGAATGCATAAGTTTAGAATACCTTCACTTACAGGGGAACTCTCTTCACGGAACCATACCTTCCACTTTGGCATCTCTCAAAGTTCTTCAATATTTAGACATGTCTAGAAATCAGTTGTCTGGATCAATTCCTGAAGGTCTCCAAAATATTGTTTTCCTAGAATACTTCAATGCATCTTTCAACATGTTGGAAGGTGAGGTTCCAATCAATGGTGTCTTTAAAAATGCAAGCGGTTTATCAGTGACTGGAAACAACAAGCTCTGTGGAGGAATTTTAGAGCTGCATCTATCTCCGTGCCCTGTCAACTTTATAAAACCTACACAACACCACAATTTTAGGTTGATAGCAGTATTAATTAGTGTGATTTCTTTCCTTCTTATACTGATGTTTATTCTAATCATGTACTGTGTGAGGAAAAGGAATAGGAAATCATCTTCTGATACAGGAACGACTGACCACCTAACTAAGGTTTCATACCAAGAACTACATCATGGAACTGATGAGTTCTCAGATAGAAATTTGATTGGATCAGGAAGTTTTGGTACCGTATACAAAGGAAATATTGTATCACAAGATAAAGTTGTTGCTATAAAGGTTCTGAACCTCAAAAAGAAGGGAGCTCATAAGAGTTTTATTGCTGAATGTAATGCACTCAAAAATATTAGACATCGAAATTTGGTCAAGGTTATAACATGTTGTTCTAGTATTGATTATAAAGGTGGAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGCTTTATCCCTGGACAGTGGATTCAGAGTATCCTAGAACATTGAACCTTGTTCAAAGACTAAATATCTCCATTGATATTGCTTCTGCATTACATTATCTTCATTGTGAATGTGAGCAAGTGGTCATTCATTGTGATATCAAGCCAAGCAACATCCTTCTCGATGATAACATGGTTGCTCACGTGAGTGATTTTGGCATAGCAAGACTTATCTCAGCCATTGACGGTACCTCTCATAAGGAAACTAGTACAACTACAATATCAGGGACCATTGGCTATGCTCCCCCAGAGTATGGAATGGGTTCTGAAGCATCAACATATGGTGACATGTATAGCTTTGGGATGCTCGTGTTGGAAATGATTACTGGAAGAAGACCTACAGATGAAAGATTTGAGGATGGTCAAAATCTACGTACGTTTGCTGAAAGTTCATTAGCTGATAATCTTTCACAGATTTTGAACCAACATTTTGTACCAAGAGATGAAGAAGCAGCAATAGAAGATGGAAATAGTGAGAATCTTATTCCAGCTGTAAAGAATTGCTTAGTTTCAGTTTTAAGGATTGGACTTGCCTGTTCAAGAGAATCACCAAAAGAAAGAATGAACATAGTAGATGTTACTAGAGAGCTAAATTTAATCCGAACAATCTTTCTTGAAGGTGTTCATGCCTCGCGAGTAATTAAACCAGAAATAAATTTCCGCCATCATTTGGAATAG 3144 0.3626 MKHFSFFLPIFWYLYLHLLLLVLPLNLTWFCPNRTVAIAEALALGNQTDHLALLQFKESISSDPNGVLDSWNSSIHFCNWHGITCNPMHQRVTKLNLQGYKLHGSMSPYIGNLSRIRNINLKNNTFFGKIPQELGRLLHLHQLLLDNNLFSGEIPINLTSCSNLKVLHLFGNNLTGKIPAEIGSLQKLIIVNIGKNNLTGGISPFIGNLSSLISFGVVYNNLEGDIPREICRLKNLIIITVTDNKLSGTFPPCLYNMSSLTLISTADNHFSGSLPSNMFQTLPNLRSFEIGGNKILGSIPTSIVNASTLTSFDISGNHFVGQVPSLGKLQDLNLLNLEMNILGDNSTKDLGFLKTMTNCSNLQVLSLAANNFGGCLPNSVGNLSFQLSELYLGGNEISGKIPEELGNLVNLTLLSMGHNHFEGIIPANFGKFQSMQRLDLRQNKLSGDIPYFIGNLSQLFDLHMEENMLEGNIPLSIGECQMLQYLNLSQNNLQGAIPLEIFSIFSLTTGLDLSQNSLSGSLPDEVGLLKNIHKLDVSENHLSGDIPITIGECISLEYLHLQGNSLHGTIPSTLASLKVLQYLDMSRNQLSGSIPEGLQNIVFLEYFNASFNMLEGEVPINGVFKNASGLSVTGNNKLCGGILELHLSPCPVNFIKPTQHHNFRLIAVLISVISFLLILMFILIMYCVRKRNRKSSSDTGTTDHLTKVSYQELHHGTDEFSDRNLIGSGSFGTVYKGNIVSQDKVVAIKVLNLKKKGAHKSFIAECNALKNIRHRNLVKVITCCSSIDYKGGEFKALVFDYMKNGSLEQWLYPWTVDSEYPRTLNLVQRLNISIDIASALHYLHCECEQVVIHCDIKPSNILLDDNMVAHVSDFGIARLISAIDGTSHKETSTTTISGTIGYAPPEYGMGSEASTYGDMYSFGMLVLEMITGRRPTDERFEDGQNLRTFAESSLADNLSQILNQHFVPRDEEAAIEDGNSENLIPAVKNCLVSVLRIGLACSRESPKERMNIVDVTRELNLIRTIFLEGVHASRVIKPEINFRHHLE* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0993 1047 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0993 1047 SUPERFAMILY L domain-like 357 640 - -
Mtr5g0993 1047 PANTHER OS04G0122200 PROTEIN 34 1032 - -
Mtr5g0993 1047 SUPERFAMILY Protein kinase-like (PK-like) 694 1019 IPR011009 -
Mtr5g0993 1047 Gene3D Ribonuclease Inhibitor 345 654 IPR032675 -
Mtr5g0993 1047 Pfam Leucine Rich repeat 160 177 IPR001611 GO:0005515
Mtr5g0993 1047 SUPERFAMILY RNI-like 94 443 - -
Mtr5g0993 1047 Gene3D Phosphorylase Kinase; domain 1 683 801 - -
Mtr5g0993 1047 SMART serkin_6 720 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0993 1047 Gene3D Ribonuclease Inhibitor 46 327 IPR032675 -
Mtr5g0993 1047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Mtr5g0993 1047 ProSiteProfiles Protein kinase domain profile. 720 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0993 1047 ProSitePatterns Protein kinases ATP-binding region signature. 726 749 IPR017441 GO:0005524
Mtr5g0993 1047 Gene3D Transferase(Phosphotransferase) domain 1 802 1029 - -
Mtr5g0993 1047 Pfam Leucine rich repeat N-terminal domain 47 86 IPR013210 -
Mtr5g0993 1047 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Mtr5g0993 1047 PANTHER LRR RECEPTOR-LIKE KINASE 34 1032 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0993 Mtr-Chr5 9847098 9859296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0993 38 1035 Receptor kinase-like Gene Family AT3G47570 44.797 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g0993 Pkinase 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0993 - - gmx:100785561 1285.01