Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0987 ATGGCACCAGGGAATTGTTGCAGCTCTGAGGTAGCAGCTACATTAAGTGTGTGTTCCATCATGGAAGATCAAAATGATGATACCTTGGGGAGTTTGAATCAGAATGTTGTTGGGAAGCCTCCAAGGGATCATTCTGCCACTATGCGTCATTGCAGCAGCTCTTCATGGCTCGTTGATTCGGAATCAAATCTTAATACTATTGTTGGCCTTAAAACAAATACAGAAGATAAATCAGAATTTCCACTTATATTGAGATCTGGAAGCAGTTCTGAGAAAGGACCAAAGCAATACATGGAGGATGAATTTATATGTATTGATATTCTTAGAGAATCTATTGCACAACAAGTAGACCTTCCATATCCATCAGCATTTTATGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTATCAAAAAGAACATGCTTAAGTTTATAACTGAAGATTCTCAATTCCCATCTAGCATTAAAAAAGCAGTTAAGAGTGCATTTGTGAAGGCTGATCATGCATTTAGAGATGCAAGTTCTCTTGATAGTTCTTCAGGAACCACTGCTCTAATAGCCCTTGTCTTGGGAAGGTCCATGCTGATTGCGAACGCTGGAGATTCACGCGCAGTATTAGGTAAACGTGGCCGAGCAGTCGAACTTTCTAAAGACCATAAACCAAATTGCACATCTGAAAAACTAAGAATTGAAAAACTAGGTGGAGTTATCTATGATGGATACCTAAATGGACAACTATCAGTGGCACGTGCACTAGGAGATTGGCACATAAAAGGTACAAAAGGTTCAAAAAGTCCCTTAAGTTGTGAGCCAGAGCTAGAAGAAATTGTTCTAACAGAAGAAGATGAGTTTTTGATATTAGGGTGTGATGGATTATGGGATGTTATGAGTAGTCAATGTGCTGTTACAATGGTTAGGAGGGAACTTGTGCAACATAATGATCCTAATATATGTGCTAAGGTACTTGTAACTGAGGCACTTCAAAGAAACACTTGTGATAATTTAACTGTTGTTGTGGTTTGTTTCTCTAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCACATAGGAGAAGGAGTATTTCAGCTGAAGGTCTTGATCTTCTCAAAGGTGTGTTGAATGGTAGATGA 1140 0.3886 MAPGNCCSSEVAATLSVCSIMEDQNDDTLGSLNQNVVGKPPRDHSATMRHCSSSSWLVDSESNLNTIVGLKTNTEDKSEFPLILRSGSSSEKGPKQYMEDEFICIDILRESIAQQVDLPYPSAFYGVFDGHGGVDAASFIKKNMLKFITEDSQFPSSIKKAVKSAFVKADHAFRDASSLDSSSGTTALIALVLGRSMLIANAGDSRAVLGKRGRAVELSKDHKPNCTSEKLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSKSPLSCEPELEEIVLTEEDEFLILGCDGLWDVMSSQCAVTMVRRELVQHNDPNICAKVLVTEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGLDLLKGVLNGR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0987 379 Pfam Protein phosphatase 2C 86 337 IPR001932 -
Mtr5g0987 379 ProSiteProfiles PPM-type phosphatase domain profile. 85 345 IPR001932 -
Mtr5g0987 379 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 19 367 - -
Mtr5g0987 379 PANTHER PROTEIN PHOSPHATASE 2C 19 367 IPR015655 GO:0004722|GO:0006470
Mtr5g0987 379 Gene3D - 67 349 IPR036457 -
Mtr5g0987 379 SMART PP2C_SIG_2 100 345 IPR001932 -
Mtr5g0987 379 SUPERFAMILY PP2C-like 78 346 IPR036457 -
Mtr5g0987 379 SMART PP2C_4 75 343 IPR001932 -
Mtr5g0987 379 CDD PP2Cc 85 345 IPR001932 -
Mtr5g0987 379 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0987 Mtr-Chr5 9814057 9817103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0987 69 377 PP2C-type Phosphatase Gene Family AT3G51470 77.346 2.16e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0987 K14803 - gmx:100786416 581.637