Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0984 ATGTCGTGTTCTTCTTCATCAGGATCGGAGGAAGATGATGAGGGCTTTGAGTCCTATCGGAAAGGTGGATACCATGCTGTTAGAGTCGCTGATCAATTCGCCGGTGGGAGGTATATTGCTCAGAGGAAACTTGGTTGGGGTCAATTTTCTACCGTTTGGCTTGCTTATGATACTACAACCTCTTCATACGTTGCTCTCAAAATCCAGAAAAGTGCAGCCGAGTTTGTTCAGGCCGCCCTTCATGAGATCAACGTTCTTTCATCCATTGCTGATGGGGACCCATCAAATTCAAAGTTTGTTGTCCAATTGATTGATAACTTTAAGCACACAGGTCCAAATGGGCAGCACCATTGCATGGTCCTTGAGTTTCTTGGCGATAGCTTGCTTCGTTTGATCAAATATAGCCATTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGTAAATACATTTTGATTGGTTTGGATTACTTGCATAGTGAACTTGGTATAATCCACACGGACTTAAAGCCTGAAAACATTCTTCTATTTTCAACTATTGATCCTTCCAAAGACCCTTTTAGATCCGGACTCTCCCCAACTTTAGAACGGACCGAGGGAAACACAAATGGCGGACTTACAAGTCTTATTGAGAAAAGGTTGAAGAGAAGAGCAAAGCGTGCAGTTGCTAAAATATCGGGAAGAACGGCTTCAATTGAAGGAAGAGGAGAAGCTGCAAAGTCTAGTAGAAATATTGAAGGGATTGATATGAGATGCAAGATTGTCGATTTTGGAAATGCATGTTGGGCTGATAACAAGTTTGCAGAAGAAATACAAACAAGGCAGTATAGAGCCCCTGAAGTTATACTGAAGTCCGGTTATTCCTTCTCTGTAGACATGTGGTCTTTTGCTTGCATTGCTTTTGAGCTTGCCACTGGAGATATGTTATTTACACCCAAAGGTGGTGGACAAGGTTATAGTGAGGATGAGGATCATCTTGCCTTGATGATGGAACTCCTCGGAAAGATGCCGCGGAAGATTGCTATTGGTGGAGCTCAATCCAAGGATTACTTTGACCGGCATGGTGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTTGACAAATTGCTGATTGATAGATATAAATTTTCAGCAAATGATGCTCAAGAGTTTTCAGAATTTCTTTTGCCACTTTTTGATTTTGCCCCAGAAAAACGACCAACTGCACGGCAATATCTGCAACACCCCTGGCTGAACTGCAATGAATCAGCACCAAATGAAATGAGAAGTGAATCTACTGTGGAAAAGGTTAATGTTGGTATGAGCAACCTTCAAATCAAGGTAGGAAAGTGA 1341 0.4154 MSCSSSSGSEEDDEGFESYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSSYVALKIQKSAAEFVQAALHEINVLSSIADGDPSNSKFVVQLIDNFKHTGPNGQHHCMVLEFLGDSLLRLIKYSHYKGLPLNKVREICKYILIGLDYLHSELGIIHTDLKPENILLFSTIDPSKDPFRSGLSPTLERTEGNTNGGLTSLIEKRLKRRAKRAVAKISGRTASIEGRGEAAKSSRNIEGIDMRCKIVDFGNACWADNKFAEEIQTRQYRAPEVILKSGYSFSVDMWSFACIAFELATGDMLFTPKGGGQGYSEDEDHLALMMELLGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLIDRYKFSANDAQEFSEFLLPLFDFAPEKRPTARQYLQHPWLNCNESAPNEMRSESTVEKVNVGMSNLQIKVGK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0984 446 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 446 - -
Mtr5g0984 446 CDD STKc_SRPK 27 414 - -
Mtr5g0984 446 SMART serkin_6 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0984 446 Pfam Protein kinase domain 39 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0984 446 Pfam Protein kinase domain 252 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0984 446 SUPERFAMILY Protein kinase-like (PK-like) 32 419 IPR011009 -
Mtr5g0984 446 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Mtr5g0984 446 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 446 - -
Mtr5g0984 446 Gene3D Transferase(Phosphotransferase) domain 1 92 414 - -
Mtr5g0984 446 ProSiteProfiles Protein kinase domain profile. 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0984 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Mtr5g0984 446 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0984 Mtr-Chr5 9786716 9790660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0984 4 415 EF-hand Containing Proteins AT5G22840 50.753 9.31e-165 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mtr5g0984 Pkinase 4.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0984 K08832 - gmx:100784192 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0984 5 9786716 9790660 Mtr8g2305 8 33483384 33487304 PCT