Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0967 ATGGGTCTTTGCTTCACCTCACTCTCTCACCAATCACCACCCTCTTCCCTCAATATTCATAACAATTCAGGGTTAGGGAGTAATAATGATGATAGTACAAAGGAAGAGTCATCATCATCATCATCATGTAATAAGAGTAAAGTTTGGGAGATTGGAAATAGTGAAAGTGATAGTAAAGGATATGAAAGCATAGAGATAAGTGGGAAGTTTCTAGAAATGCCAAATTTAAAGGTGTTTAGTTATGGAGATTTGAAGGCTGCCACAAAGAGTTTCAAATCAGATGCATTACTTGGTGAAGGAGGTTTTGGTAAAGTGTATAAAGGTTGGTTAAATGCTGTGACACTGGCACCTGCAAAAGCTGGTTCTGGAATGATAGTGGCTATCAAGAAATTGAAACGTGATAGTGTTCAAGGTCTTCAAGAATGGCAGTCAGAAATCAATTTTTTAGGAAGGATTTCTCACCCCAACTTGGTGAAGCTACTAGGTTACTGTAGGGACAACGATGAATTTCTCCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTGGAGAATCATCTCTTTAGAAGAAATACTAACATAGAGCCACTTTCTTGGAACACTCGACTCAAAATAGCGACTGATGCAGCTCGAGGCTTAGCTTTCTTGCACTCCTCGGATAAGCAAGTCATATATAGAGATTTCAAGGCTTCCAATATACTTCTTGATGGGAATTACAATGCAAAAATTTCAGATTTTGGGTTGGCTAAATTTGGGCCATCTGGTGGAGATTCACATGTGACTACTAGGATCATGGGCACATATGGTTATGCTGCTCCGGAATACATGGCAACAGGTCATTTGTATGTGAAGAGTGATGTTTATGGATTTGGTGTAGTGCTGCTTGAAATGTTGACAGGATTGCAAGCATTTGATTCAAATAGGCCTGAAGGGCAGCAAAACCTAATTGAATGGATAAAGCCATCTCTCTCTGATAAAAGAAAGTTGAAAAGTAACAACATTGTTGATTACAGGTTAGAGGGTCAATATACATCAAAGGCAGCATTTGAAACAGCACACCTTATTCTTAAATGCCTTCAACCTGACCCTAAAAAACGTCCTTCAATGAAGGATGTTTTAGGGATATTGGAAGCCATAAAAGCTATCAAGGTTAAAAGGAAGATATCTAAGAATCGTTGTACTAAGTCTGCAACTATGGACAGTTTATAA 1206 0.3881 MGLCFTSLSHQSPPSSLNIHNNSGLGSNNDDSTKEESSSSSSCNKSKVWEIGNSESDSKGYESIEISGKFLEMPNLKVFSYGDLKAATKSFKSDALLGEGGFGKVYKGWLNAVTLAPAKAGSGMIVAIKKLKRDSVQGLQEWQSEINFLGRISHPNLVKLLGYCRDNDEFLLVYEFMPRGSLENHLFRRNTNIEPLSWNTRLKIATDAARGLAFLHSSDKQVIYRDFKASNILLDGNYNAKISDFGLAKFGPSGGDSHVTTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLQAFDSNRPEGQQNLIEWIKPSLSDKRKLKSNNIVDYRLEGQYTSKAAFETAHLILKCLQPDPKKRPSMKDVLGILEAIKAIKVKRKISKNRCTKSATMDSL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0967 401 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 36 391 - -
Mtr5g0967 401 SUPERFAMILY Protein kinase-like (PK-like) 66 375 IPR011009 -
Mtr5g0967 401 PANTHER OS01G0588500 PROTEIN-RELATED 36 391 - -
Mtr5g0967 401 CDD STKc_IRAK 97 378 - -
Mtr5g0967 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Mtr5g0967 401 MobiDBLite consensus disorder prediction 1 45 - -
Mtr5g0967 401 Pfam Protein kinase domain 92 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0967 401 ProSiteProfiles Protein kinase domain profile. 91 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0967 401 Gene3D Phosphorylase Kinase; domain 1 75 176 - -
Mtr5g0967 401 Gene3D Transferase(Phosphotransferase) domain 1 177 399 - -
Mtr5g0967 401 ProSitePatterns Protein kinases ATP-binding region signature. 97 130 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0967 Mtr-Chr5 9598795 9601401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0967 77 375 Glycoside Hydrolase AT3G07070 48.667 1.66e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr5g0967 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0967 - - gmx:100794193 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0967 5 9598795 9601401 Mtr8g2314 8 33605720 33610293 PCT