Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0933 ATGAAAACAATGATAGCAACTTCGTTTGATGTCTCCGCCGCATGCTTCCTTACACGTCCTCAAATTCTACGGCAGAACACGACCATAACAAGTTTTTCGTTTATAAAATCTTCCAAATTTAATAAGGTACACAGAAGTGTTGTTGTTCAACCAAAGTTTTCGAACTTCCGCACGATGTGTGGTTTAAAGGGGAATTTAGAAGAAGTTGTTGGAGTTCCAACCTCGGTGCCAGTGCGTGTAGCTCACGAGCTTCTTCTAGCTGGCCATAAGTATTTGGATGTAAGGACCACGGAAGAGTTTAATGCTGGACACGCTCCTGGTGCAATTAACATACCTTATATGTACAAAGTTGGATCAGGGATGACAAAGAACAGCAATTTTGTTAAAGAGGTCTCCTCACATTTTAGAAAAGAAGATGAAGTTATTGTTGGTTGTCAGCTTGGGAAAAGGTCTATGATGGCTGCTACTGACTTGTTAGCTGCTGGGTTCACTGGACTCACAGACATAGCTGGTGGTTATGCTGCTTGGACTCAAAATGGACTTCCTACAGAACAATGA 558 0.4194 MKTMIATSFDVSAACFLTRPQILRQNTTITSFSFIKSSKFNKVHRSVVVQPKFSNFRTMCGLKGNLEEVVGVPTSVPVRVAHELLLAGHKYLDVRTTEEFNAGHAPGAINIPYMYKVGSGMTKNSNFVKEVSSHFRKEDEVIVGCQLGKRSMMAATDLLAAGFTGLTDIAGGYAAWTQNGLPTEQ* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0933 185 ProSiteProfiles Rhodanese domain profile. 85 185 IPR001763 -
Mtr5g0933 185 CDD RHOD 92 176 - -
Mtr5g0933 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 185 - -
Mtr5g0933 185 Gene3D - 65 184 IPR036873 -
Mtr5g0933 185 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 72 184 IPR036873 -
Mtr5g0933 185 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 185 - -
Mtr5g0933 185 SMART rhod_4 75 182 IPR001763 -
Mtr5g0933 185 Pfam Rhodanese-like domain 91 178 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0933 Mtr-Chr5 9233341 9235072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0933 67 182 Sulfurtransferasese or Rhodanese AT5G66170 46.610 2.12e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0933 - - aprc:113868825 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0933 5 9233341 9235072 Mtr8g2398 8 34364716 34366544 PCT