Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0928 ATGGCGGAAACCGGCGGTGAAGTTAACGGTGACGGTTTTACATATCTTCACGGCGATCTCGACTTAACTATAATCTCCGCTCGCCGGTTACCGAACATGGATATGTTTTCCGAGCGTTTCTGCCGCTGCATAACCGCTTGCGACACTATTAAATTCCACTCGCCACCTTCTGACTCCACCACCACCGCCGCCGACGGAGGAACCACCACACACCGGGAACATCATCACCGGAGAAAAATCATACGAAGTGATCCCTACGTAACTGTTTCTGTACCGCAAGCAACCGTTGCACGGACACGTGTGTTGAAGAATTCACTGAATCCTGAGTGGAAGGAACGGTTTCACATTCCGTTAGCACATCCGGTTATTGATTTGGAGATTCGTGTTAAAGATGATGATGTGTTTGGTGCTGAAGTTATGGGAATGGTGAAGATTCCGGCCAAGAGAATTGCTACCGGAGAGTTGATTTCCGGTTGGTTTCCTATTGTTGCTTCATCCGGTAAACCACCGAAGCCGGATACAGCTTTGAATATAGAAATGAAGTTTACTCCGGTGGATGAGAATCCGCTATACCTGCGTGGCATTGCGGCTGATCCGGAACATGGAGGAGTGAGGCATACGTATTTTCCGGTGAGGAAGGGGAGTTCTGTGAGGCTTTATCAAGATGCACATTGTCCAGAAGGAACTGTACCGGAGATTCAGCTTGATAATGGGAAGGTTTATAGAGCGGAGAATTGTTGGGAAGATATATGTTATGCTATAACAGAAGCTCATCATATGGTTTATTTAGCGGGTTGGTCGATTTATGATAAGGTGAAGCTTGTTAGGGAACCTTCTAGGCCTTTGCCGAAAGGTGGCGATTTAACACTTGGTGATTTGCTTAAGTATAAGAGTGAAGAAGGTGTGAGGGTTTTATTGCTTGTTTGGGATGATAAAACTTCCCATGATAAGCTCTTTTTCAAGACGACTGGAGTAATGGAGACGCATGATGAGGAAACTAGGAAGTTTTTCAAACATTCTTCTGTCATGTGTGTTTTGGCGCCTCGCTATGCTAGTAGTAAGATGAGCTTCATTAAGCAACAGGTTGTTGGAACCGTCTTCACACACCACCAAAAATGTGTTATTGTAGACGCACAAGCTGCTGGTAATAACAGAAGGGTAGCTACTTTTATAGGAGGTCTCGATCTCTGTGATGGTCGCTATGACACACCTGAGCATCGGCTTTTTCGTGATCTTGATACTGTATTTGCCGGTGATTTCCACAATCCTACATTTCCTTCTGGAACAAGGGCTCCTAGACAACCTTGGCATGATTTGCACTGCAGAATAGACGGACCCGCTGCATATGACGTTCTTATTAATTTTGAACAACGATGGAGAAAAGCAACCAAGTGGAAAGAGTTTGCAATTCTTTTCAAAAAAGCTTCTCAGTGGAACGACGACGCTTTAATAAGAGTAGACCGTATCTCATGGATATTAAGTCCATCTCTTCCTACTCTTCCTACCCCAAAGGAATCAAAGGAAGGTTATACAATTGTTCCAGGGGATGACCCTCTATTATGGGTTTCTAGTGAAAATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCTTGAAAGGATTTCCCAAACGTGCTGATCAGGCTCTATCCCAGAATCTCATATGTGCTAAAAATTTGACTATAGAAAAAAGCATTCAAACAGGATATATCCAAGCTATCAGATCTGCTCAACATTTCATTTATATTGAAAACCAATACTTTATTGGATCTTCATATGCATGGCCATCTTACAATAATGCAGGTGCTGATAATCTTATCCCAATGGAATTGGCACTGAAAATTGCTAGTAAAATCAAAGCTAAGGAGAGATTTGCTATTTATATTGTTTTACCTATGTGGCCAGAAGGTGATCCTAAATCTGGAGCTGTGCAAGAAATCCTTTTCTGGCAGGCTCAGACAATGCAAATGATGTATAATGTTGTTGCTAAAGAATTGAAATCAATGCAACTTAGTGATGTGCATCCACAAGACTACCTCAATTTCTATTGCCTTGGTAATCGGGAACACTTCAATGAAGAAAGTTCAGGCTCAAATAGTGCACCGGTCTCTGGAGCATTTAAATATCGTCGAAATATGATCTATGTGCATGCCAAGGGGATGATCGTGGATGATGAATATGTTATATTGGGATCTGCCAACATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTTCATATCAACCCCATTACACATGGTCTGCGAGGAAAAAACATCCACATGGCCAGATTTATGGTTATAGAATGTCACTTTGGGCAGAGCATCTTGGTATGTTAGATGAAACATTTAAAGAGCCAGAAAGATTGGAGTGTGTGCGTAAAGTGAATGAAATAGCAGACGATAATTGGAGAAAATACGCTTCTGAAGAAATGTCACTGCTACAGGGACATCTTCTTAAGTATCCCGTACAAATAGATTCTGATGGGCAGGTCAGTTCATTACCTGATTGTGATAGTTTCCCAGATGCTGGTGGTAAGATATTGGGGGCTCATTCCGCGACAATTCCAGATATCCTAACAACGTAA 2619 0.425 MAETGGEVNGDGFTYLHGDLDLTIISARRLPNMDMFSERFCRCITACDTIKFHSPPSDSTTTAADGGTTTHREHHHRRKIIRSDPYVTVSVPQATVARTRVLKNSLNPEWKERFHIPLAHPVIDLEIRVKDDDVFGAEVMGMVKIPAKRIATGELISGWFPIVASSGKPPKPDTALNIEMKFTPVDENPLYLRGIAADPEHGGVRHTYFPVRKGSSVRLYQDAHCPEGTVPEIQLDNGKVYRAENCWEDICYAITEAHHMVYLAGWSIYDKVKLVREPSRPLPKGGDLTLGDLLKYKSEEGVRVLLLVWDDKTSHDKLFFKTTGVMETHDEETRKFFKHSSVMCVLAPRYASSKMSFIKQQVVGTVFTHHQKCVIVDAQAAGNNRRVATFIGGLDLCDGRYDTPEHRLFRDLDTVFAGDFHNPTFPSGTRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATKWKEFAILFKKASQWNDDALIRVDRISWILSPSLPTLPTPKESKEGYTIVPGDDPLLWVSSENDPENWHVQIFRSIDSGSLKGFPKRADQALSQNLICAKNLTIEKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYNNAGADNLIPMELALKIASKIKAKERFAIYIVLPMWPEGDPKSGAVQEILFWQAQTMQMMYNVVAKELKSMQLSDVHPQDYLNFYCLGNREHFNEESSGSNSAPVSGAFKYRRNMIYVHAKGMIVDDEYVILGSANINQRSMAGTKDTEIAMGSYQPHYTWSARKKHPHGQIYGYRMSLWAEHLGMLDETFKEPERLECVRKVNEIADDNWRKYASEEMSLLQGHLLKYPVQIDSDGQVSSLPDCDSFPDAGGKILGAHSATIPDILTT* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0928 872 SUPERFAMILY Phospholipase D/nuclease 208 470 - -
Mtr5g0928 872 Pfam C2 domain 18 162 IPR000008 -
Mtr5g0928 872 ProSiteProfiles C2 domain profile. 1 160 IPR000008 -
Mtr5g0928 872 Gene3D Endonuclease Chain A 538 765 - -
Mtr5g0928 872 PANTHER PHOSPHOLIPASE D 13 872 IPR015679 -
Mtr5g0928 872 SUPERFAMILY Phospholipase D/nuclease 568 802 - -
Mtr5g0928 872 SMART C2_3c 19 159 IPR000008 -
Mtr5g0928 872 Pfam Phospholipase D C terminal 791 861 IPR024632 -
Mtr5g0928 872 SMART pld_4 365 400 IPR001736 GO:0003824
Mtr5g0928 872 SMART pld_4 717 744 IPR001736 GO:0003824
Mtr5g0928 872 CDD C2_plant_PLD 15 183 - -
Mtr5g0928 872 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Mtr5g0928 872 PIRSF PLD_plant 7 872 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mtr5g0928 872 Gene3D C2 domain 16 194 IPR035892 -
Mtr5g0928 872 PANTHER PHOSPHOLIPASE D DELTA 13 872 - -
Mtr5g0928 872 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 717 744 IPR001736 GO:0003824
Mtr5g0928 872 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 16 185 IPR035892 -
Mtr5g0928 872 Pfam Phospholipase D Active site motif 717 744 IPR001736 GO:0003824
Mtr5g0928 872 Pfam Phospholipase D Active site motif 365 400 IPR001736 GO:0003824
Mtr5g0928 872 Gene3D Endonuclease Chain A 231 483 - -
Mtr5g0928 872 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0928 Mtr-Chr5 9170918 9178704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0928 16 708 Phospholipase D Gene Family (Wang group) AT4G35790 69.264 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0928 K01115 - gmx:100814486 1460.66