Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0911 ATGGAAGAAGTTTGGAAAGACATAAACCTGTCTTCATTGAATGACCAAAACACACGACCCATGATAATGAGTACTCGTAATTCCACTTTTGGTGGTGGTGTTATCCTTCAAGACTTTCTCACTCGACCCCTTACTTTAGACCCAACAAAAAGCTTAGATTATTCTTCTAATAATTCATCTTCTTCTGTTGCTTCAGATCAAAATAACAATAATGCCTCATTTTATTGCCCTATCTCTACGACCCCACCACCTCTTGTCACTGCTCTTAGTTTGAACTCTCGTCCTGATTTTCTCTATGACCCTCTTATCAGACACAACAAGCATAATAATTCTCAGTTACTACTTCAACAGCAACAACATAACATTGGTGTATCGAATGTTTCTCCTTGTTTCGTAAATGCTTCACCGTGTGATCAGAATGTGGGTGTTCCTGCATCTAGTTCTTTCACTTGTTTTGGAAAGAGATTTGGTGAAGCACCTGATATTAGCCCCGGTGAAAGGAGAAATAAGAGGATGATCAAGAATCGGGAATCTGCTGCACGGTCACGAGCTAGAAAACAGGCTTACACCAATGAACTAGAGCAGAAAGTTCAATTATTGCAGGAAGAGAATGCAAGACTTAGAAGACAGCAACAAGAGTTATGGGAAGCAGAAAGTGGTGGTCAGCAAAAGAAAAAGAGTAGCTTATATCGAACATCATCCTTTTGA 708 0.3969 MEEVWKDINLSSLNDQNTRPMIMSTRNSTFGGGVILQDFLTRPLTLDPTKSLDYSSNNSSSSVASDQNNNNASFYCPISTTPPPLVTALSLNSRPDFLYDPLIRHNKHNNSQLLLQQQQHNIGVSNVSPCFVNASPCDQNVGVPASSSFTCFGKRFGEAPDISPGERRNKRMIKNRESAARSRARKQAYTNELEQKVQLLQEENARLRRQQQELWEAESGGQQKKKSSLYRTSSF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0911 235 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 234 IPR043452 GO:0003700|GO:0045893
Mtr5g0911 235 MobiDBLite consensus disorder prediction 212 235 - -
Mtr5g0911 235 Coils Coil 183 220 - -
Mtr5g0911 235 Pfam bZIP transcription factor 167 216 IPR004827 GO:0003700|GO:0006355
Mtr5g0911 235 SMART brlzneu 163 228 IPR004827 GO:0003700|GO:0006355
Mtr5g0911 235 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 214 IPR004827 GO:0003700|GO:0006355
Mtr5g0911 235 PANTHER PROTEIN FD-LIKE 1 234 - -
Mtr5g0911 235 CDD bZIP_plant_BZIP46 167 214 - -
Mtr5g0911 235 Gene3D - 165 218 - -
Mtr5g0911 235 SUPERFAMILY Leucine zipper domain 167 215 IPR046347 GO:0003700|GO:0006355
Mtr5g0911 235 MobiDBLite consensus disorder prediction 215 235 - -
Mtr5g0911 235 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0911 Mtr-Chr5 9034959 9037155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0911 1 187 bZIP Transcription Factor Family AT4G35900 36.000 9.71e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr5g0911 bZIP_1 2.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0911 K14432 - mtr:MTR_7g015990 204.527