Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0893 ATGGCAAAAAACATAGACAAAACAAGTTCTGATTCTGAAAATTCTTTATGTTCATCAAGTTCAAGCCCTCCAATGAGTAATAAGTATAGGTACATGTTCAATAGACTATTCAGGTTTGCCAATTCATGGAAGAAAAGTAACTCACCAAGAGGTAGAAGAATCTTCCATAGGGATGTTGAGAAAGAAGAATTTCAATATGCTAGTAGTCACTGTCTTTCATCCTACTACAGTGTTTTTGTGGTTAGATTAGCAATCATGGTAATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTCACAAAGATTTATACGAAAAAATCATTGAGTAGTTTGGCATATGGTCTGCGTTATGAACTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAATTCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAATATGTTATCAGACGTTATAGCAACCCTGCATCTCAAGCTGAGCAAGTTGAGCTATATGAAGCAATGAGGGCAGTAACATGGTCACTATTTGCTAGTAGAAAAGCACTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAACACATTTTACATCTACTCAGATCTTTCTAATTACTCCATGGTTGCAACAACCTCAAACATGCTCAAGTCCATTTCAACTCATCAAGCTTGGGATGATAAAACACTTCATGGAAACTTCTCAGCAATTTGGTATAGAGAACCACTTGATCCTGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAACATAGCAGGACTTTCACAAGTTCCTGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCACCTTTGCTTTCAGCAGCATTACCTGTTTGGGATTCATCGAATAAAAGTATTATGGCTGTTGTCGGTGTAACGACTGCATTTTATAGTGTTGGACAGTTAATGAGAGAGTTAGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACAAGTGCACCTTTGCTTACAAATTCAACTAAGCCGCCTCCAAAGCTTAAGATGGCGGTGGATTGTGAAGATGAAATAATAAGACTTGGAGCCGAGTGGCTGCAGAGAACTTATGGAAATCATTTTCCTAATTCAACTCATGAGGTTCATGTTGAGAATGCTAAGCTTGGGAATCAGCAATATTACATCGACTCGTTCTACCTAAACTTGAAGAGACTTCCTTTGGTAGGCGTAATCATCATACCAAGAAAGTATATCATGGGACAGGTGGATGAGAGATCTTTCAAGACATTGGTTATTCTGATATCTGCATCTTTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATCTGAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAGTATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTACTCCGACTTCTTAACAACATATTGGATCTGAGCAAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTCGATCTGGGACGCGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGCAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCTGGTCATGTTATTCTACGAGGATGGTGTGAATATCCAAACTCTTGCAACGATAGTCCGAATTTTTATCTTGATCAGAAGAAATCAAGAAATTTACATAAGAGCAAAGAGAAGCCAAATGCAAGTCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATTGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGACTGCATGGAGGGACTGGTCTTGGTCTTTGCATTGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGTCAAGGAACATTGATGAGATTATGTTTGCTTCTTAGTGCACCAGTGGATGTCACAGAGCAACATGCTTTAAATTTGACAGACAATGGCTTAGTAGTATTGCTTGCACTACAAGGAAACATGGGTAGAATAATAACATCAAAGTGGTTAACCAAAAAAGGGGTGTGCACAATGGAAGCATCTGAATGGAATGGACTAACACAAATTTTGAGGGAACTCTTTCATGCAAGAAGTTCAATCCATAACAGTAACAACTTTGATGCACACTATCCAATAAATCTTGAAGGATTTAAGTCTAAACTACTAAGCATCAAAGACATGAGGAATCCAATTTTTGTCATTGTTGTTGACATTGGTTTGCTTGACTTAAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTATTTTGGAAGAGCGAAATTTGTGTGGATGCTGAATCATGACACATCAAATACCATAAAGACGGAGCTTCGTCGGAAAGGACACTTATTAATGGTTAACAAACCTCTTTACAAAGCAAAAATGATTCATATTTTGGAAGCTGTTATAAAAGAGAGAAATCATGAGTTGCAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCATTTTGATGCTGCTACTAGCTCTGATGATTCTGACATATCTGAAATTAGTGAAAAACCAATTGTAAAGTTAACCAATGAAAATGAACATTTGGAAGAAAATAATTCAAGGAAAGAAGAATCTTGTTCCTCTGAAGAGAAGAAAGCTAAAGAAACAAACTTTGCAACACAAGGTTATGATAGGGTGACAAGGACAAGAAAAGAAGTGAATGATAAGAAATCACTTGAGGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACAATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTTAATTATATGGCAAGTGCTGAAGATTGTAGAAGAGAGTCTCTCCAGAAGGACAGAAACACAAGATCACAGACAGAGATTTTAACATGCCATCAATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGAAATAAGGAAATCAGAGGAAGGAACAGGAAAACACATTCCAATTGTTGCTCTAACAGCCCATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCTTATGGTCTCAACCATTCTCTCACTCACTAAACCAACAAACTAG 3603 0.3727 MAKNIDKTSSDSENSLCSSSSSPPMSNKYRYMFNRLFRFANSWKKSNSPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVATTSNMLKSISTHQAWDDKTLHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPKLKMAVDCEDEIIRLGAEWLQRTYGNHFPNSTHEVHVENAKLGNQQYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNASHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGQGTLMRLCLLLSAPVDVTEQHALNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARSSIHNSNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTSNTIKTELRRKGHLLMVNKPLYKAKMIHILEAVIKERNHELQKKNMKEGDLHEFLEIDSTHFDAATSSDDSDISEISEKPIVKLTNENEHLEENNSRKEESCSSEEKKAKETNFATQGYDRVTRTRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMASAEDCRRESLQKDRNTRSQTEILTCHQYDLILMDCQMPKMDGYEATKEIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTN* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0893 1200 SMART REC_2 1050 1192 IPR001789 GO:0000160
Mtr5g0893 1200 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 564 770 IPR036890 -
Mtr5g0893 1200 MobiDBLite consensus disorder prediction 1 23 - -
Mtr5g0893 1200 SUPERFAMILY CheY-like 1048 1196 IPR011006 -
Mtr5g0893 1200 ProSiteProfiles Histidine kinase domain profile. 516 774 IPR005467 -
Mtr5g0893 1200 PANTHER TWO-COMPONENT HISTIDINE KINASE 1026 1197 - -
Mtr5g0893 1200 PANTHER TWO-COMPONENT HISTIDINE KINASE 25 1013 - -
Mtr5g0893 1200 SMART HisKA_10 509 575 IPR003661 GO:0000155|GO:0007165
Mtr5g0893 1200 Pfam Response regulator receiver domain 1109 1191 IPR001789 GO:0000160
Mtr5g0893 1200 PRINTS Bacterial sensor protein C-terminal signature 699 713 IPR004358 GO:0016310|GO:0016772
Mtr5g0893 1200 PRINTS Bacterial sensor protein C-terminal signature 717 727 IPR004358 GO:0016310|GO:0016772
Mtr5g0893 1200 PRINTS Bacterial sensor protein C-terminal signature 734 752 IPR004358 GO:0016310|GO:0016772
Mtr5g0893 1200 PRINTS Bacterial sensor protein C-terminal signature 758 771 IPR004358 GO:0016310|GO:0016772
Mtr5g0893 1200 PANTHER OSMOSENSOR HISTIDINE KINASE 1026 1197 - -
Mtr5g0893 1200 PANTHER OSMOSENSOR HISTIDINE KINASE 25 1013 - -
Mtr5g0893 1200 Gene3D - 577 774 IPR036890 -
Mtr5g0893 1200 Coils Coil 993 1020 - -
Mtr5g0893 1200 CDD REC_hyHK_CKI1_RcsC-like 1052 1192 - -
Mtr5g0893 1200 ProSiteProfiles Response regulatory domain profile. 1051 1196 IPR001789 GO:0000160
Mtr5g0893 1200 SMART HKATPase_4 622 774 IPR003594 -
Mtr5g0893 1200 Pfam His Kinase A (phospho-acceptor) domain 510 575 IPR003661 GO:0000155|GO:0007165
Mtr5g0893 1200 Gene3D - 1028 1196 - -
Mtr5g0893 1200 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 497 576 IPR036097 GO:0000155|GO:0007165
Mtr5g0893 1200 Gene3D - 497 576 - -
Mtr5g0893 1200 CDD HisKA 510 571 IPR003661 GO:0000155|GO:0007165
Mtr5g0893 1200 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 622 772 IPR003594 -
Mtr5g0893 1200 MobiDBLite consensus disorder prediction 999 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0893 Mtr-Chr5 8884040 8891094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0893 28 1199 Histidine Kinase Gene Family AT2G17820 65.549 0.0 1582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr5g0893 HATPase_c 5.2e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0893 - - gmx:100814068 1884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0893 5 8884040 8891094 Mtr5g0893 5 8884040 8891094 ECH
Mtr5g0893 5 8884040 8891094 Mtr8g2394 8 34326770 34333098 PCT