Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0888 ATGGCTGCTGTTTCAGCAAACTTGTTACCTCGTTGTTTGGCGTTTTTTCTTCTTCTTGTTTTTGTCTTGTGTAGCTCAGGAGCAAAGGTTGTCACCATTGATGTACACGCAGCCAAGAATCTCATCCAGACCGGTCACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGAGAAAGGGCATGTAGATGCAACTAAGATCATTAATATTCCATACCTGTTGGATACACCCAAGGGCAGGGTGAAGAACCTGAATTTTGTAAAGCAGGTTTCATCATCTTGCGACAAAGAAGATTGTCTCGTTGTGGGTTGCCAAAGTGGGAAGAGATCTTTTTCTGCAACTTCTGAACTTCTAGCTGATGGTTTTAAGAATGTGCACAACATGGGAGGAGGTTATATGGAATGGGTTAGTAACAAGCTTCCAGTGATACAACAGTAG 438 0.4224 MAAVSANLLPRCLAFFLLLVFVLCSSGAKVVTIDVHAAKNLIQTGHIYLDVRTVEEFEKGHVDATKIINIPYLLDTPKGRVKNLNFVKQVSSSCDKEDCLVVGCQSGKRSFSATSELLADGFKNVHNMGGGYMEWVSNKLPVIQQ* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0888 145 Gene3D - 22 142 IPR036873 -
Mtr5g0888 145 ProSiteProfiles Rhodanese domain profile. 42 144 IPR001763 -
Mtr5g0888 145 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 29 143 IPR036873 -
Mtr5g0888 145 Pfam Rhodanese-like domain 38 137 IPR001763 -
Mtr5g0888 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 15 143 - -
Mtr5g0888 145 SMART rhod_4 33 141 IPR001763 -
Mtr5g0888 145 CDD RHOD 37 136 - -
Mtr5g0888 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 15 143 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0888 Mtr-Chr5 8843075 8844669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0888 29 142 Sulfurtransferasese or Rhodanese AT5G66170 57.018 2.89e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0888 - K15692 gmx:100815122 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0888 5 8843075 8844669 Mtr5g0888 5 8843075 8844669 ECH
Mtr5g0888 5 8843075 8844669 Mtr8g2398 8 34364716 34366544 PCT