Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0887 ATGTTGTTATTCTCTAATAATAATTTTGCAGCTGAAAAATGGCTAGGATTTGTGACAGCCATATGGGTTCAAGCAATATGTGGAAACAATTATACATTTGCAAACTATTCAGATGTGTTAAAGTCTCTAATGGCTCTAACTCAGATGCAGCTTAATGATCTCTCTGTTGCTAAAGATGTTGGCAAAGCTTTTGGTATTTTATCAGGTCTTGTTTCTGATCGTTGGCCAACTTCAGCTATTCTTATCATTGGTGCTATTATGGGATTCATTGGTTATGGAGCTCAATGGCTTGTTGTTAGCCAAAGAATAGCCCCTCTTCCTTATTGGCTGATGTGTATATTCTTGTGTATGGGTGGAAACAGCAGCACATGGATGAACACAGCAGTACTTGTAACTTGCATGAGAAACTTTCCAAAAAATCGTGGTCCAATTTCCGGCATTCTAAAGGGTTATGTAGGACTCAGCACAGCAATCTTCACTGACATATGCACAGCTTTATTTTCCTCAGACCCATCGAAGTTTCTATTAATGCTCACAATTGTTCCTGCCATCATTTGTCTCATTGCTGCTATTTTCCTTCATGAAACTCCACCAGCTTCAACTTCCACAGAAGAAAATAAAGAGACGCAGTTCTTCAATGTGTTTAACTTGATTGCAGTTACAGTAGCTGTTTATCTCTTGGCATTTGATATCTCTGGACCTCATAAACATGTTATTTCATTGGTTTTCACAGTAGGACTTTTGATCCTATTAGCTATGCCACTTCTTGTTCCTTTATATTTGGTCGTATTCAAAACTAGGCCTAGTGTTGACAAAGAAAAAGAGGTTCATGAACCTTTGTTGGCACAAAAGGTTTCAGAAGAAAAGGAAGAGACACGCACCAAGGAAGAGGAAGTTGAGATTAAAAGAAAACCGGTGATAGGTGAAGAGCATACAATCATTGAAATGGTTAAAACTATTGATTTTTGGGTTTTGTTTGTATCATTTCTATGTGGTGTGGGAACAGGACTATGTGTGATGAATAACTTGGGACAAATGGGACAGGCACTTGGTTACCATGATGTTTCTTTGTTCATTTCATTCATAAGCATTTGGGGTTTCTTTGGACGCATTCTTTCTGGATCACTCTCTGAATACTACATCAGAAAATCAGGCATGCCAAGGTTAGTTTGGAATGCAGCATCTCAAATTCTGATGTTTTTTGGTTACATTGCATTGGCAATGGCCTTACCAGGGTCACTATACATTGGTTCAATCTTAGTAGGAATATGTTACGGAGTTCGTCTTACTATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTATACAACATCCTCATTCTCAACCTTCCTATCGGTTCATTCATCTTTTCTGGTCTCATTGCCGGCTACCTTTATGATATTGAAGCCACCAGTGTGCCAGGAGGCGGAAACACTTGCAGTGGAGCACATTGTTTCATGCTTGTGTATGTGATTATGGCTTTCGCTTGTGTATTGGGGTGTGGATTAGACCTGTTTCTTGCATTTAGAACAAAGAATGTATATTCCAAGATACATACAGAGAGAAATCTTGTCAATTCTCAAGTTCAACACTGA 1614 0.386 MLLFSNNNFAAEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNDLSVAKDVGKAFGILSGLVSDRWPTSAILIIGAIMGFIGYGAQWLVVSQRIAPLPYWLMCIFLCMGGNSSTWMNTAVLVTCMRNFPKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAIICLIAAIFLHETPPASTSTEENKETQFFNVFNLIAVTVAVYLLAFDISGPHKHVISLVFTVGLLILLAMPLLVPLYLVVFKTRPSVDKEKEVHEPLLAQKVSEEKEETRTKEEEVEIKRKPVIGEEHTIIEMVKTIDFWVLFVSFLCGVGTGLCVMNNLGQMGQALGYHDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAASQILMFFGYIALAMALPGSLYIGSILVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDIEATSVPGGGNTCSGAHCFMLVYVIMAFACVLGCGLDLFLAFRTKNVYSKIHTERNLVNSQVQH* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0887 537 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 532 - -
Mtr5g0887 537 Pfam Nodulin-like 13 259 IPR010658 -
Mtr5g0887 537 CDD MFS_Mch1p_like 13 507 - -
Mtr5g0887 537 Gene3D MFS general substrate transporter like domains 12 208 IPR036259 -
Mtr5g0887 537 SUPERFAMILY MFS general substrate transporter 45 519 IPR036259 -
Mtr5g0887 537 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 532 - -
Mtr5g0887 537 Gene3D MFS general substrate transporter like domains 209 507 IPR036259 -
Mtr5g0887 537 Coils Coil 282 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0887 Mtr-Chr5 8838560 8841750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0887 11 533 Nodulin-like Gene Family AT4G34950 61.931 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0887 - - cit:102624072 749.199