Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0883 ATGGAACACCACAAAGATTGTTTGGACGCCGATTCCAGTGAAGAAGAATACACAGATGGTTTAATAGATGAAGAACATCATAGTTCGTCTGATGCTGAAGATGATGTTGATGGTAATGCTGATGATGATGTTCATGATGAATCAGTTCAACTAGAGGGTTCAATCAGCGATGCTTTAGCAGGCGACAGGTTGGTGAATGTAAATTCCATTGCCTCTGATGAAATTCTTAAACTTGAATTTGGTACTGCTGATGAAGCGTATGAATTTTATTATCGTTATGGAAAATGCAAAGGTTTTTCCATTAGGAAATGTGATGTTAGGCGCAATAGTAGTGGAATAATTACAATGAGGGAGTTTGTCTGCAACAAGAATGGGTTAAGAGACAAGAAGCACTTATCTAGGAATGATAGGAAAAGAGATCATAGACGTCTCACCCGAACAAATTGCGAAGCAAGGCTTCGTGTGCATTACAAAGCCAAAAAAGGGAGATATGTAGTGTCTAGGTTTGAAGAGGGGCATAACCATGAAGTAACCCCACCTAAATTTACACACTTGCACCCACTGTATCGTAAAATCTCTGAAGCAGATAGGGCCCAACTTGATGCTCTTCAATCACATGGAATCAGAAAATGCCATATAATGGGATATATGGTTGCTCAGAAGGGTGGATATGCTGATGTAGGTTTTACTAAGAAAGATTTGTATAACTATTTTGATAAAAAGATGCGTGGTATCATTAAAGACGGTGATGTTGCTGCTGCTCTAAAGTATCTTAATGTGAAGTCTTCCACCGATCCAATGTTATATGCTGAATACGATGTCAACAATGATGGAAGAATGAAAAGTCTGTTTTGGGCTGATGGGAGTAGTAGGTCTGATTATTTTTGTTTTGGCGACGTTTTGGCGTTTGACACAACGTACAAGAAGAACAAATACAATTATCCGTTGTGTATATTTTCTGGGTGTAACCACCATTCACAGACCATTATATTTGGTGTTGCGTTGTTGGAGGACGAAACAATTGAGTCATATAAGTGGGTCTTGAACCATTTTTTAGAATGCATGGAAAGTAAATTCCCAAAAGCAGTGGTAACAGATGGAGATGGATCAATGAGGGAAGCTATTAAACAAGTATTCCCTGATGCATCTCATCGGTTATGTGCCTGGCATCTGCACAAGAATGCGCAAGAAAATATAAAGAAAACACCATTTCTGGAGGGTTTTAGAAAAGCAATGTACTCAAATTTTACACCGGAGCAATTTGAGGAGTTTTGGTCAGAGTTGATTCAGAAGAATGAACTTGAAGGAAATGCTTGGGTTATTAAGACATACGCGAACAAGTCACTGTGGGCAACCGCATATTTACGTGATAAGTTCTTTGGACGTATTAGAACCACATCTCAATGTGAAGCTATCAATGCAATTGTCAAGACATATTCCAGAGCCAAAGGCAAAATTTTTGAATTTATGCATAATTTTGAACAGGTTTTGAGAGGTTACAGAAACAATGAGCTTGTTGCTGACTTTAAATCAAAATTCACAGAACCTGTGTTGTCAACTCACCTACGTTTGATTGAGATTGATGCTGCCAGAATTTACACGGCAGAGATCTTTAAAGAAGTTAAAGATGAAATTATTGATTCTGGTGCAATACGTCTCGAGGAAAAAAAAGTGTGGGGGATTCCTTGGTTTATACATTGCGAAAATATCGTGACAAAGGCATTGAAAGAGAGGTTGTATACAATGCTGCAAGTTTAG 1758 0.3828 MEHHKDCLDADSSEEEYTDGLIDEEHHSSSDAEDDVDGNADDDVHDESVQLEGSISDALAGDRLVNVNSIASDEILKLEFGTADEAYEFYYRYGKCKGFSIRKCDVRRNSSGIITMREFVCNKNGLRDKKHLSRNDRKRDHRRLTRTNCEARLRVHYKAKKGRYVVSRFEEGHNHEVTPPKFTHLHPLYRKISEADRAQLDALQSHGIRKCHIMGYMVAQKGGYADVGFTKKDLYNYFDKKMRGIIKDGDVAAALKYLNVKSSTDPMLYAEYDVNNDGRMKSLFWADGSSRSDYFCFGDVLAFDTTYKKNKYNYPLCIFSGCNHHSQTIIFGVALLEDETIESYKWVLNHFLECMESKFPKAVVTDGDGSMREAIKQVFPDASHRLCAWHLHKNAQENIKKTPFLEGFRKAMYSNFTPEQFEEFWSELIQKNELEGNAWVIKTYANKSLWATAYLRDKFFGRIRTTSQCEAINAIVKTYSRAKGKIFEFMHNFEQVLRGYRNNELVADFKSKFTEPVLSTHLRLIEIDAARIYTAEIFKEVKDEIIDSGAIRLEEKKVWGIPWFIHCENIVTKALKERLYTMLQV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0883 585 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 556 IPR031052 GO:0006355
Mtr5g0883 585 MobiDBLite consensus disorder prediction 1 44 - -
Mtr5g0883 585 MobiDBLite consensus disorder prediction 20 34 - -
Mtr5g0883 585 Pfam FAR1 DNA-binding domain 88 178 IPR004330 -
Mtr5g0883 585 Pfam MULE transposase domain 300 394 IPR018289 -
Mtr5g0883 585 PANTHER OS02G0262500 PROTEIN 74 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0883 Mtr-Chr5 8792343 8795424 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g0883 MULE 5.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0883 - - ccaj:109792835 699.123