Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0882 ATGGGTGACATAGTGAAACAAATATTAGCAAAACCGATCCAACTAGCAGACCAAGTAACAAAAGCAGCAGATGAAGCAAGTTCATTCAAACAAGAATGTTCTGAGCTCAAATCCAAAACAGAAAAACTCGCTACTCTTCTCCGTCAAGCAGCAAGAGCGAGCTCTGATCTCTACGAACGTCCAACAAAACGGATCATCGAAGAAACAGAACAAGTACTCGACAAAGCACTTTCATTAGTCCTAAAATGTCGTGCTAATGGTCTCATGAAACGTGTCTTCACCATCATACCAGCTGCAGCCTTCCGTAAAACATCCTCCCATCTAGAAAACTCTATTGGTGATGTTTCATGGCTTCTTCGAGTATCTGCCCCCGCTGATGATCGCGGTGGCGAGTATCTTGGACTTCCACCAATAGCAGCCAATGAACCTATATTATGTTTTATATGGGAGCAGATCGCTATGTTATTCACCGGTTCACAAGAAGTTCGTTCTGATGCAGCTGCTTCGCTTGTGTCATTGGCACGAGGCAGTGACCGATACGGGAAGCTTATAATTGAAGAAGGTGGGGTTGGTCCACTTTTGAAGCTGATCAAAGAAGGGAAAGCTGATGGACAAGAGAATGCTGCTAGAGCTATTGGTCTGCTTGGTCGTGACGCGGAGAGTGTTGAACATATGATTCATGTTGGTGTTTGTTCTGTTTTTGCGAAAATTCTTAAAGAAGGTCCTATGAAAGTTCAAGGTGTTGTTGCTTGGGCTGTTTCTGAACTTGCTGCTAATTATCCTAAATGTCAGGAACTTTTTGCTCAGCATAATATTATTAGGTTGCTTGTTGGTCATTTAGCTTTTGAAACTGTTGAGGAACATAGTAAGTATGCTATTGTTAGTATGAAAGCGAATTCGATTCACGCCGCTGTTGTTATGGCTAGTAATAATAATAATTCTAGCTCTAATCTTAATCCCAAGAAGGGAACTGAAAATGAAGATGGTGTTGTTGTTGGTGGTGGCAATAAACATGGTCGTGTATCACATCATCCATTAGGTGAAAGACCAAGAAATCTGCATAGAGTGATCACAAGTACTATGGCAATTCATGCTGCTTCCAAGCAGCCCAATGAAGGAAATGAAGCAAATCAAAATCAGAACATTTTGGCCAATTCCAATACTCCTAATGGTAATGGACTCGGTAATGGTAATGGTAATGGTAATGATGGTGGGAAGCAAGGAAATCATAATAATCATCAGAGAAATTATTCGCATTCGGGGATTAACATGAAGGGAAGGGAATCTGAAGATGCTGAGACTAAGGCAAGTATGAAGGAAATGGCAGCAAGAGCTCTATGGCATTTGGCTAAAGGTAATGTGGCAATTTGTCGAAGCATTACAGAATCAAGGGCGTTGTTGTGTTTTTCTGTTTTGCTTGAGAAAGGACCGGAGGCTGTGCAATACAATTCCGCGATGGCGTTGATGGAGATTACTGCTGTGGCTGAGAAAGATGCTGAATTGAGGAAATCTGCATTCAAGCCTAATTCTCCTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATAATTGAGAAAGCAGATTCAGATCTTCTCATACCGTGTGTCAAGGCGATTGGGAATTTGGCAAGGACATTCAAGGCTACCGAGACAAGGATGATCGGTCCATTGGTAAAACTTCTTGATGAAAGAGAGGCAGAGGTTTCAAGGGAGGCGTCAATCGCGCTTAGGAAATTCGCCGGCAGTGAAAACTACCTTCATGTTGATCACTCCAAGGCAATTATCAGTGCAGGTGGGGCAAAACACTTGATTCAGCTTGTATATTTTGGAGAACAAATGGTTCAGATTCCAGCATTGGTTCTGCTCTCTTACATTGCATTGCATGTGCCGGATAGCGAGGAACTTGCTCTGGCTGAGGTGCTAGGAGTGCTTGAATGGGCATCCAAGCAATCTTTCATGCAACATGATGAAACCCTTGAAGAATTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCATCATAAATTGCATCAGTAG 2064 0.4249 MGDIVKQILAKPIQLADQVTKAADEASSFKQECSELKSKTEKLATLLRQAARASSDLYERPTKRIIEETEQVLDKALSLVLKCRANGLMKRVFTIIPAAAFRKTSSHLENSIGDVSWLLRVSAPADDRGGEYLGLPPIAANEPILCFIWEQIAMLFTGSQEVRSDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKADGQENAARAIGLLGRDAESVEHMIHVGVCSVFAKILKEGPMKVQGVVAWAVSELAANYPKCQELFAQHNIIRLLVGHLAFETVEEHSKYAIVSMKANSIHAAVVMASNNNNSSSNLNPKKGTENEDGVVVGGGNKHGRVSHHPLGERPRNLHRVITSTMAIHAASKQPNEGNEANQNQNILANSNTPNGNGLGNGNGNGNDGGKQGNHNNHQRNYSHSGINMKGRESEDAETKASMKEMAARALWHLAKGNVAICRSITESRALLCFSVLLEKGPEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSPACKAVVDQVLKIIEKADSDLLIPCVKAIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALRKFAGSENYLHVDHSKAIISAGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHDETLEELLQEAKSRLELYQSRGSRGFHHKLHQ* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0882 687 PANTHER ARMADILLO REPEAT ONLY 4 1 682 - -
Mtr5g0882 687 MobiDBLite consensus disorder prediction 310 349 - -
Mtr5g0882 687 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Mtr5g0882 687 SUPERFAMILY ARM repeat 152 644 IPR016024 -
Mtr5g0882 687 Coils Coil 36 56 - -
Mtr5g0882 687 SMART arm_5 509 544 IPR000225 GO:0005515
Mtr5g0882 687 SMART arm_5 218 258 IPR000225 GO:0005515
Mtr5g0882 687 SMART arm_5 177 217 IPR000225 GO:0005515
Mtr5g0882 687 SMART arm_5 587 627 IPR000225 GO:0005515
Mtr5g0882 687 SMART arm_5 453 493 IPR000225 GO:0005515
Mtr5g0882 687 Coils Coil 656 676 - -
Mtr5g0882 687 MobiDBLite consensus disorder prediction 366 434 - -
Mtr5g0882 687 Gene3D - 507 663 IPR011989 -
Mtr5g0882 687 Gene3D - 148 320 IPR011989 -
Mtr5g0882 687 Gene3D - 428 506 IPR011989 -
Mtr5g0882 687 PANTHER - 1 682 - -
Mtr5g0882 687 MobiDBLite consensus disorder prediction 366 423 - -
Mtr5g0882 687 Gene3D - 3 121 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0882 Mtr-Chr5 8775830 8778537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0882 - - mtr:MTR_5g022240 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0882 5 8775830 8778537 Mtr5g0882 5 8775830 8778537 ECH
Mtr8g2407 8 34498320 34501151 Mtr5g0882 5 8775830 8778537 PCT