Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0881 ATGCTCTCTTCAATATCTCTTCCTTCTTCTCTCTACGCCGCCGGTAATTTCTCCGGCACCACCGTAACACCACCGCCGTGTCGTGTCAGATCAAAGCCAATAATCACAACAGCAAGCTCCACATCCACCGCCGAACCTCGCTCTACATGGACGACAGAACAACAAAGACCTTCGTATTTAAATATGAGCTCCTTTTCTCACTCTTCTCCTGGATCGCACTATGACATCCTCGGTATATCAGCAGCTGCCTCCAACCAAGAAATCAAGGCAGCGTACCGGCGACTTGCAAGACTCTGCCACCCTGACGTGGCGTCGGTTGATCGGAAAAACTCGTCGGCAGATGATTTCATGAAAATTCAGGTTGCTTACTCTACACTCTCAGATCCTGATAAACGTGCTAATTATGATCGGAGTCTTTTCCTCCGGCGACAACGGCCGTTGTCGTCATCGGCGATAATATCTTCCGGTTACTCAGGTCGGAAATGGGAGACTGATCAATGTTGGTAA 507 0.4911 MLSSISLPSSLYAAGNFSGTTVTPPPCRVRSKPIITTASSTSTAEPRSTWTTEQQRPSYLNMSSFSHSSPGSHYDILGISAAASNQEIKAAYRRLARLCHPDVASVDRKNSSADDFMKIQVAYSTLSDPDKRANYDRSLFLRRQRPLSSSAIISSGYSGRKWETDQCW* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0881 168 PANTHER - 1 168 - -
Mtr5g0881 168 SUPERFAMILY Chaperone J-domain 42 135 IPR036869 -
Mtr5g0881 168 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 168 - -
Mtr5g0881 168 Pfam DnaJ domain 73 136 IPR001623 -
Mtr5g0881 168 PRINTS DnaJ domain signature 74 92 IPR001623 -
Mtr5g0881 168 PRINTS DnaJ domain signature 92 107 IPR001623 -
Mtr5g0881 168 PRINTS DnaJ domain signature 111 131 IPR001623 -
Mtr5g0881 168 Gene3D DnaJ domain 60 153 IPR036869 -
Mtr5g0881 168 SMART dnaj_3 71 131 IPR001623 -
Mtr5g0881 168 CDD DnaJ 73 128 IPR001623 -
Mtr5g0881 168 ProSiteProfiles dnaJ domain profile. 72 139 IPR001623 -
Mtr5g0881 168 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0881 Mtr-Chr5 8746696 8747620 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0881 62 136 C2H2 Transcription Factor Family AT1G74250 43.038 1.70e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0881 - - gmx:100800959 217.238