Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0878 ATGCTTTCCTCCATATCTCTTCCTTCTTCTCTCTACGCCGCCGGTAACTTCTCCGGCACGTCCGTCACTCCACCGTCGTGCCGCGTTAAATCAAAGCCGATAGTCATAACCTCCAGCGCTACAGCAACCGCGGAAGCTCGCTCTACATGGACAGAACAACAAAGACCTTCCTATCTTAACATGAACTCTTCTTCTCACTCTTCTCCAGCATCACTTTACCAGATTCTCGGTATATCAGCAGGTGCTTCCAATCAAGAAATAAAGGCGGCATACCGGCGACTTGCAAGAGTCTGCCATCCTGATGTTGCGGCAATTGATCGGAAAAACTCATCGGCGGATGATTTCATGAAGATTCACTCTGCATATTCCACGCTTTCGGATCCAGATAAACGTGCTAATTATGATCGGAGTCTTTTCCGGCAACAACTACGGCCGTTGTCAACGATGGTGTCTTCTGGATACTCAAGTCGAAAATGGGAAACGGATCAGTGTTGGTAG 498 0.4819 MLSSISLPSSLYAAGNFSGTSVTPPSCRVKSKPIVITSSATATAEARSTWTEQQRPSYLNMNSSSHSSPASLYQILGISAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADDFMKIHSAYSTLSDPDKRANYDRSLFRQQLRPLSTMVSSGYSSRKWETDQCW* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0878 165 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 165 - -
Mtr5g0878 165 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
Mtr5g0878 165 SMART dnaj_3 70 130 IPR001623 -
Mtr5g0878 165 PRINTS DnaJ domain signature 73 91 IPR001623 -
Mtr5g0878 165 PRINTS DnaJ domain signature 91 106 IPR001623 -
Mtr5g0878 165 PRINTS DnaJ domain signature 110 130 IPR001623 -
Mtr5g0878 165 Gene3D DnaJ domain 57 156 IPR036869 -
Mtr5g0878 165 CDD DnaJ 73 127 IPR001623 -
Mtr5g0878 165 Pfam DnaJ domain 72 135 IPR001623 -
Mtr5g0878 165 PANTHER - 1 165 - -
Mtr5g0878 165 ProSiteProfiles dnaJ domain profile. 71 138 IPR001623 -
Mtr5g0878 165 SUPERFAMILY Chaperone J-domain 69 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0878 Mtr-Chr5 8715586 8716440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0878 61 135 C2H2 Transcription Factor Family AT1G74250 43.038 1.00e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0878 - - gmx:100800959 231.106