Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0869 ATGGAACAGCCTCAACAACAACAACAACCACAGACACAACAACATTCACCAAACAATGGGATTATGGGAAGCAGACAAAGTAGTACAAGGTGGACACCAACAACAGATCAGATAAGAATATTGAAGGATCTTTACTACAACAATGGAATTAGATCACCAAGTGCAGAACAGATTCAGAGAATCTCTGCTAGGTTAAGACAGTATGGTAAGATTGAAGGCAAAAATGTCTTTTATTGGTTTCAAAATCACAAAGCTAGAGAAAGACAGAAGAAAAGGTTCACTTCTGATGTTAATGTTGTTCCCATCATTCAAAGAGCACCAAACAACAATACTATTATTTCTGCTGCTAATTGGAAACCTGATCATCATGAACAACAACAAAACATTAATGTTCATACCAACCATTCTACTTACAACATTTCATCTGCTGGGCTTTCTTCTGCTTCATGTTCTTCTGCTGAGATGGTTACTGTAGGCCAGATTGGTAACTATGGATATGGATCTGTCCCCATGGAAAAGAGTTTTAGGGAGTGTACAATTTCAGCTGGATGTAGCAGCAGTCAAGTTGGAAGTACCATAAACCCTCACATAGGATGGATTGGTCATCATGTCGATCCATATTCTTCAGCTTATGCCAACTTATTTGAAAAAATAAGACCAAATGAAGAAATCATGGAAGAATATGATCAAGGACAAGAAAATGGTTCACCTGAAATTGAAACCCTCCCTTTATTCCCTATGCATGGTGAAGACATTCATGGTGGCTATTGTAACCTCAAATCAAATTCATCTAACTATGGTGGTTGGTATCAAGCTGAAGATGCTGGATTCATGTATGGTTCTCGTACTACTTCCTTGGAACTTAGCCTCAACTCTTACGGCTGTAGGTCACCAGATTATGCTAATTAA 909 0.3828 MEQPQQQQQPQTQQHSPNNGIMGSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVNVVPIIQRAPNNNTIISAANWKPDHHEQQQNINVHTNHSTYNISSAGLSSASCSSAEMVTVGQIGNYGYGSVPMEKSFRECTISAGCSSSQVGSTINPHIGWIGHHVDPYSSAYANLFEKIRPNEEIMEEYDQGQENGSPEIETLPLFPMHGEDIHGGYCNLKSNSSNYGGWYQAEDAGFMYGSRTTSLELSLNSYGCRSPDYAN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0869 302 PANTHER PROTEIN WUSCHEL 1 295 - -
Mtr5g0869 302 CDD homeodomain 29 91 IPR001356 GO:0003677
Mtr5g0869 302 Gene3D - 22 89 - -
Mtr5g0869 302 ProSiteProfiles 'Homeobox' domain profile. 24 90 IPR001356 GO:0003677
Mtr5g0869 302 SMART HOX_1 26 94 IPR001356 GO:0003677
Mtr5g0869 302 SUPERFAMILY Homeodomain-like 21 95 IPR009057 -
Mtr5g0869 302 MobiDBLite consensus disorder prediction 1 33 - -
Mtr5g0869 302 Pfam Homeodomain 28 89 IPR001356 GO:0003677
Mtr5g0869 302 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 295 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0869 Mtr-Chr5 8573632 8575366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0869 25 255 Wox Gene Family AT2G17950 40.310 1.51e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr5g0869 Homeodomain 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0869 - - vra:106776674 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0869 5 8573632 8575366 Mtr5g0869 5 8573632 8575366 ECH