Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0866 ATGGCTATAAAAAAATCCAACAAACTACCACAAGCTGAAGTTATCAAGCAAATTGTCAAAAGATGTTCAAGTTTTGGCAAAAGGCAGAGTTACAATGAAGAGGGTCTTCCTGAGGATGTACCAAAAGGTCATTTTGTAGTTTATGTTGGAGAGAATAGAACAAGATACATTATTCCAATTTCTTGGTTGGCACATCCTCAATTTCAAAGTTTGCTACAAAGAGCTGAAGATGAATTTGGCTTCAATCATGATATGGGACTTACTATCCCTTGTGATGAAGTTTTTTTTGAGTCCTTAACTTCAATGATGAGATAA 315 0.3492 MAIKKSNKLPQAEVIKQIVKRCSSFGKRQSYNEEGLPEDVPKGHFVVYVGENRTRYIIPISWLAHPQFQSLLQRAEDEFGFNHDMGLTIPCDEVFFESLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0866 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Mtr5g0866 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
Mtr5g0866 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0866 Mtr-Chr5 8530328 8531223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0866 5 103 Calmodulin-binding Proteins AT4G34750 40.404 5.58e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0866 K14488 - gmx:100798840 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0866 5 8530328 8531223 Mtr8g2421 8 34636785 34637536 ECH
Mtr3g4255 3 56411568 56412405 Mtr5g0866 5 8530328 8531223 ECH
Mtr5g0866 5 8530328 8531223 Mtr5g0866 5 8530328 8531223 ECH
Mtr4g2181 4 35369982 35370793 Mtr5g0866 5 8530328 8531223 ECH