Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0842 ATGGATTCGCTTCTAAAATCTCCAATCATGGAGAACTTGAAGGAAGAACCATTTCTTATGGCAATCATGTTCATCGTACCACTAATACTCTTGTTGGGTTTAGTGTCACGAATCCTCAAAAGACCAAGATATCCACCAGGACCAATAGGGTTACCTATTATAGGTAACATGTTAATGATGGACCAATTAACCCACCGTGGTCTAGCCAACTTAGCCAAAAAATATGGTGGCATCTTTCACCTACGCATGGGATTCCTCCACATGGTAGCTATTTCCGACGCGGATGCCGCACGACAAGTTCTGCAAGTTCAAGACAACATCTTTTCCAACCGGCCAGCAACTGTAGCCATTAAATACCTAACTTACGACCGTGCTGACATGGCGTTTGCTCACTATGGTCCCTTTTGGCGCCAGATGCGAAAACTCTGCGTGATGAAGCTTTTCAGCCGTAAACACGCCGAGTCTTGGCAATCTGTTAGAGACGAGGTTGACTATGCTGTCCGAACTGTTTCAGACAACATAGGCAACCCTGTGAACATTGGAGAACTAGTATTCAACTTAACCAAAAACATTATATATCGAGCGGCTTTCGGGTCGAGCTCGAGAGAAGGACAAGATGAGTTTATTGGAATATTGCAAGAGTTTTCCAAATTGTTTGGAGCTTTTAATATTTCTGATTTTGTACCTTGCTTTGGAGCTATTGATCCTCAAGGGCTTAATGCTAGGCTTGTGAAGGCTCGTAAAGAATTGGATAGTTTCATAGACAAAATCATAGATGAACATGTGCAGAAGAAGAAGAGTGTTGTTGATGAAGAAACGGATATGGTGGATGAGTTGCTTGCTTTCTATAGCGAGGAAGCTAAATTGAATAATGAATCAGATGATTTGAATAATTCTATCAAACTTACCAAGGATAATATCAAAGCCATCATCATGGACGTGATGTTTGGAGGAACGGAAACGGTAGCATCAGCAATTGAATGGGCCATGGCAGAGTTAATGAAAAGCCCAGAAGACCTAAAGAAAGTCCAACAAGAGCTAGCAGAAGTTGTGGGCCTGAGCCGACAGGTCGAAGAGTCCGATTTTGAGAAACTAACTTATCTGAAATGCGCTCTTAAGGAAACCCTACGTCTTCACCCACCAATTCCATTGCTTCTTCACGAAACTGCGGAAGAAGCAACAGTTAATGGTTATTTCATTCCAAAGCAAGCGCGTGTGATGATAAACGCATGGGCTATTGGAAGAGATGCAAATTGTTGGGAGGAACCTCAGAGTTTTAAGCCGTCACGGTTTTTGAAACCAGGTGTGCCCGATTTCAAAGGAAGTAATTTTGAGTTTATTCCATTTGGGTCAGGACGTAGATCCTGTCCCGGTATGCAGTTGGGTTTGTACGCGCTTGATTTGGCGGTAGCTCATTTACTTCATTGCTTCACTTGGGAGTTGCCAGATGGAATGAAGCCAAGTGAGATGGATATGAGTGATGTATTTGGACTCACTGCTCCAAGAGCGAGTCGACTCGTTGCTATCCCTACTAAGCGTGTCTTGTGTCCTCTGGATTAG 1560 0.4327 MDSLLKSPIMENLKEEPFLMAIMFIVPLILLLGLVSRILKRPRYPPGPIGLPIIGNMLMMDQLTHRGLANLAKKYGGIFHLRMGFLHMVAISDADAARQVLQVQDNIFSNRPATVAIKYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKHAESWQSVRDEVDYAVRTVSDNIGNPVNIGELVFNLTKNIIYRAAFGSSSREGQDEFIGILQEFSKLFGAFNISDFVPCFGAIDPQGLNARLVKARKELDSFIDKIIDEHVQKKKSVVDEETDMVDELLAFYSEEAKLNNESDDLNNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKKVQQELAEVVGLSRQVEESDFEKLTYLKCALKETLRLHPPIPLLLHETAEEATVNGYFIPKQARVMINAWAIGRDANCWEEPQSFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPTKRVLCPLD* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0842 519 PANTHER CYTOCHROME P450 84A1-RELATED 6 519 - -
Mtr5g0842 519 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Mtr5g0842 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 Pfam Cytochrome P450 45 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 6 519 - -
Mtr5g0842 519 Gene3D Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g0842 519 Coils Coil 286 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0842 Mtr-Chr5 8279167 8282615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0842 52 518 Monolignol Biosynthesis Gene Families AT4G36220 77.378 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0842 K09755 - gmx:100783430 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0842 5 8279167 8282615 Mtr8g2435 8 34781169 34785163 ECH
Mtr5g0842 5 8279167 8282615 Mtr5g0842 5 8279167 8282615 ECH
Mtr8g2435 8 34781169 34785163 Mtr5g0842 5 8279167 8282615 PCT