Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0809 ATGGAGAAGACTCAACTGGATAACCTATTTCCTCTAACTCCAAGTGCCGTATTCTCTACAAAGAAGGGACGTAGCGGATATGAACCATCAGACACAGAGACGGAGTGGCAAGACACTCCACGTCATGAACGAGGAAGAAAGAACAACATGACTTTGAGTCCAGAAGAAACAAAAGCTTTGTATCTAAGGAACAAAAGTCCTATGACACTCCACAAGAGACACCCTTCAAGGTTTGAATTTGAAGTCCCATCATCACCTTCAATAACAGGTTCAGTTCTTAACCAACCAAGAAGAAGACATCTCAGTAAATCACCCTATAGGCCACGCGTAGCACATGATAATCATTATGATGTTGATGGTAATGATGATGATGCTTCGTTAACAAACATAACAGGTGTGAACTCACGTAGAAATATGAGTCCTTTGCCAAGGCCTGACATTGGAAGAACATTGTCTCCTTATAACAGAAACCGTGAGCAAAGAGCACCTTATAATGAAAATAGGAAAGCAAGTTCAGGGCTTCTAGAAATGGATAGAGTGGGTACAAAATCAAACTACAAGAGAGCAGTGACTGCTCCAAGATTGAGAGACCAACAACAAACAGTGCAAAACACTGCGAGAACTCTGAAACAAAGGGAAAAATCTCCTTTCAAAACAGGTTTAGTTAAAGAAAGAGAAATCAATGAAATGATAGCAGAGGTGAAACTATCAAAAAACCCTACTGATGATTATTCATCAGCACTCGAAAGTACAGACTCAATTCAAACAGGTGATCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGCGAAGAATTCTTCAATGCCAAAAAAAGTTCAACAATACGAGTATTTTAGCCCTAGACAAGTGATCACCACCATTAATCCCATTACCAACCCATGTGAAAGTGGTAAACACGGTATGAATATGAATATGCCAAGAAACTATTCAAGTAATGTGTTGTTGTCTCGAACATCGGCAGCCACATCAATCAGAAAGGGAAGTGGAACTGGGAAGCCTAGTGCTAACTCTAGTGTGAAAAGTGATGCTAGTACAAAGACAACCGAAAGCATGAGGAAATTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTGCTTGTATGATGAGAACAGGAAACTGTAGGATTTCAAGAAAATCGCCTGAACGCAGACCCATTGATGAAGCTTCATTGATCGAGAGGGCAATAATTGTGGAAAGCATTCCACAATTATGGGCAGATAAACATAAACCAGCTTCACTTGATGGCTTCATTTGCAACAAACAAGAAGCTCAACTACTCAAGGAATTAGTGTCACAGGGCTCTTGTCCTCATATTTTACTCAAAGGACCCTCTGGTTCTGGGAAAAGAGACCTAGCAATGGCTTTTCTTAGAGAAATATATGGTGATGCATGTTGTAATCTGTCACATGATTTACGACATTTCCCTATTCAGGACAAAAGGACCATGAAAGTATCGGTTCCAATAACGTCCAGTTCTCATCATATGGAGGTCAATGTAAATTCAGAACCAAATGCTAAATATGCTTTGATGGGATTAATCAAAGAAATTAGCAATATATATGCAATTACCCCTGAAGTAAGTAATGTGAATTTCAAGTCAGATTATAAAGGTTAG 1644 0.3929 MEKTQLDNLFPLTPSAVFSTKKGRSGYEPSDTETEWQDTPRHERGRKNNMTLSPEETKALYLRNKSPMTLHKRHPSRFEFEVPSSPSITGSVLNQPRRRHLSKSPYRPRVAHDNHYDVDGNDDDASLTNITGVNSRRNMSPLPRPDIGRTLSPYNRNREQRAPYNENRKASSGLLEMDRVGTKSNYKRAVTAPRLRDQQQTVQNTARTLKQREKSPFKTGLVKEREINEMIAEVKLSKNPTDDYSSALESTDSIQTGDLFFSRECNALQAKNSSMPKKVQQYEYFSPRQVITTINPITNPCESGKHGMNMNMPRNYSSNVLLSRTSAATSIRKGSGTGKPSANSSVKSDASTKTTESMRKFTSNRKKNQKDAWFACMMRTGNCRISRKSPERRPIDEASLIERAIIVESIPQLWADKHKPASLDGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRDLAMAFLREIYGDACCNLSHDLRHFPIQDKRTMKVSVPITSSSHHMEVNVNSEPNAKYALMGLIKEISNIYAITPEVSNVNFKSDYKG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0809 547 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 124 138 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 329 364 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 81 160 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 26 51 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 82 98 - -
Mtr5g0809 547 PANTHER OS02G0704966 PROTEIN 212 541 - -
Mtr5g0809 547 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 472 IPR027417 -
Mtr5g0809 547 Gene3D - 412 547 IPR027417 -
Mtr5g0809 547 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 212 541 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 106 122 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 1 54 - -
Mtr5g0809 547 MobiDBLite consensus disorder prediction 329 358 - -
Mtr5g0809 547 CDD AAA 429 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0809 Mtr-Chr5 7989621 7991836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0809 413 527 Core DNA Replication Machinery Family AT5G27740 38.462 4.96e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0809 K10756 - gmx:100795321 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0809 5 7989621 7991836 Mtr5g0809 5 7989621 7991836 ECH