Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0792 ATGCAGCAAAACAAAAACCCATTCCCAATCTCACTACACAACACACATGTAAAGCTATTAGCTTTCGATCTTCTAACCCTAACCCCACCGATCTCCCCAAACCACTCCTTCACCCGCAACTCTATCCCCATCACACGCGCTGAAACCGTAGGAACCATAACCCTCCGCGACCACAAACCCTTCAAATTCCTCCGTTTCGCTATCGACGACGGAACCGGTTGCATCCCTTGTATTCTCTGGCTTAACCACATGACTTCTCCTCATTTAGCTCGCCGGCGTAGTCCTCAGGATCTCTGTCTTCTTGCTGATGCTGCTGCGAGATCGGCGGAAGTGGTGAAGGTTGGGAATGTTGCTAGGGTTAGAGGGAGGGTTACGGAGTATAAAGGAGGGGTGCAGATAACTGTTACGGATGTTATTAGTGAGAGGGATCCGAATGTTGAGGTTTTGCATTGGGTTGAGTGTGTTAATTTGGCTAGGAATTGTTATAATCTTGTTAATGTTTCTTCTTCTTCTGGTTCTGGTTCTGGTTCTGGTTCAGTAGTACCTAAATTGAATTAG 558 0.4677 MQQNKNPFPISLHNTHVKLLAFDLLTLTPPISPNHSFTRNSIPITRAETVGTITLRDHKPFKFLRFAIDDGTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYKGGVQITVTDVISERDPNVEVLHWVECVNLARNCYNLVNVSSSSGSGSGSGSVVPKLN* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0792 185 Gene3D - 11 165 IPR012340 -
Mtr5g0792 185 PANTHER CST COMPLEX SUBUNIT STN1 11 165 - -
Mtr5g0792 185 Pfam OB-fold nucleic acid binding domain 53 138 IPR004365 GO:0003676
Mtr5g0792 185 PANTHER REPLICATION PROTEIN A-RELATED 11 165 IPR040260 -
Mtr5g0792 185 SUPERFAMILY Nucleic acid-binding proteins 34 156 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0792 Mtr-Chr5 7821401 7822119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0792 40 157 Core DNA Replication Machinery Family AT2G24490 27.119 5.87e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0792 K23312 - csin:114287844 202.986