Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0773 ATGTCTTCCCCTCCTGATTCTGATAACTCTTCTTCGACGCCTTCAGATTCTCCACCAGAAGAGTCACCACAATCACCACCACCATCACCACCTTCAGATTCCCAGCCGTCTCCTTCAGGATCACCGCCACCGCCACCACCTTCAGGATCACAACCTTCTCCTCCACCACCTACATCAAACAAACCATCCCCACCATCCCCCAATGGATCCGGAAATTCACCAACTCCGGTAGCGGGACGTCCTCCACCAGCCTCCAATAGATCTGGAAATTCACAATCACCTCCACACAAATCACCAACTACGCCAACTGGACACTCAAATGGTAATCACAACAACAATAACAATAACAATAACAATGATGATGCCACTAAGGCAATAGTTGGAGTAGTGATTGGGGTGGCAGTTGCTCTTATCATTTTGGTCATCGCTTGCTTTGTCTGCTGCAGGAAGAAGAAAAGAAAGTACTATTATGGAGAACGCCCACCTCCTGGAAAAGGGAATAGTAACTATTACACTAGTGGGCATCACTCAAATTACTATGGAGATCGGGAACATGTTGTTAGGGTTCAAAATGGAATGGGTCCAAATGGTGGTGGTGGTGGATGGGGTGCACCACCACCTCCTCCTATGGGAATGACCAGTACAGACATGAGCTCGAATTATTCGGGCGGACCACCACCTCTTCCTCCTCCCTCACCAAGCCTTGCTTTAGGGCTTAAAGGAGGCACATTCACTTATGAGGAATTGGCAGCTGCAACCGACGGATTCATTGATTCAAATTTGATAGGACAAGGTGGTTTTGGCTATGTCCATAAGGGGGTGTTACCGAGTGGAAAGGAAATAGCTGTCAAGAGTTTAAAATCGGGTAGCGGACAAGGAGAACGGGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGTCATCTTGTTTCACTTGTTGGATATTGTATTTCTGGTGGCCAAAGAATGTTGGTCTATGAATTTATTTCCAATAACACATTGGAGTATCATCTCCACGGAAAGGGTCGTCCTACCATGGATTGGCCGACGAGAATGAGGATCGCAATTGGTTCTGCTAAAGGGCTTGCTTATCTTCATGAGGATTGTCATCCACGCATTATCCATCGTGATATAAAAGCTGCAAATGTCCTTATTGATGATAGCTTTGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACATCTGATAATAATACTCACGTATCAACTCGTGTAATGGGAACTTTTGGGTATCTAGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCCGACGTTTTCTCATTTGGGGTCATGCTATTGGAACTTGTAACTGGGAAGCGACCTGTGGATGCCTCAATTACCATGGACGATAGCTTAGTCGACTGGGCTCGACCACTATTGACTCGTGGACTCGAGGAGGATGGAAACTTTAGCGAGTTGGTGGATCCATTTTTGGAAGGAAACTATGATCCTCAAGAACTCGCTAGAATGGCAGCTTGCGCTGCTGCTAGCATTCGTCACTCTGCCAGGAAGCGTTCTAAAATGAGTCAGATTGTAAGAACATTGGAAGGAGATGTCTCATTGGATGACTTGAAGGAGGCAATTAAGCCAGGGCACACCACTGTTAATACCTCATCTGGTAGCGAGTATGACACAGTGCAGTACAACAGTGATATGCAGAAGATGAGAAAGACAGTGTTTTCCAGCCATGAATCTAACACCAGCAGCTTCACCAGTAGTGGCGAGATGGGCCAAACTCCACCAAAGCTGAAGACTCCACAACAATTGCCTTAA 1815 0.4601 MSSPPDSDNSSSTPSDSPPEESPQSPPPSPPSDSQPSPSGSPPPPPPSGSQPSPPPPTSNKPSPPSPNGSGNSPTPVAGRPPPASNRSGNSQSPPHKSPTTPTGHSNGNHNNNNNNNNNDDATKAIVGVVIGVAVALIILVIACFVCCRKKKRKYYYGERPPPGKGNSNYYTSGHHSNYYGDREHVVRVQNGMGPNGGGGGWGAPPPPPMGMTSTDMSSNYSGGPPPLPPPSPSLALGLKGGTFTYEELAAATDGFIDSNLIGQGGFGYVHKGVLPSGKEIAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFISNNTLEYHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELVTGKRPVDASITMDDSLVDWARPLLTRGLEEDGNFSELVDPFLEGNYDPQELARMAACAAASIRHSARKRSKMSQIVRTLEGDVSLDDLKEAIKPGHTTVNTSSGSEYDTVQYNSDMQKMRKTVFSSHESNTSSFTSSGEMGQTPPKLKTPQQLP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0773 604 MobiDBLite consensus disorder prediction 19 81 - -
Mtr5g0773 604 ProSiteProfiles Protein kinase domain profile. 256 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0773 604 Pfam Protein tyrosine and serine/threonine kinase 261 458 IPR001245 GO:0004672|GO:0006468
Mtr5g0773 604 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Mtr5g0773 604 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 22 592 - -
Mtr5g0773 604 SUPERFAMILY Protein kinase-like (PK-like) 233 529 IPR011009 -
Mtr5g0773 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Mtr5g0773 604 MobiDBLite consensus disorder prediction 1 18 - -
Mtr5g0773 604 Gene3D Transferase(Phosphotransferase) domain 1 332 543 - -
Mtr5g0773 604 MobiDBLite consensus disorder prediction 572 604 - -
Mtr5g0773 604 PANTHER RECEPTOR-LIKE KINASE 22 592 - -
Mtr5g0773 604 MobiDBLite consensus disorder prediction 84 119 - -
Mtr5g0773 604 MobiDBLite consensus disorder prediction 1 119 - -
Mtr5g0773 604 MobiDBLite consensus disorder prediction 190 230 - -
Mtr5g0773 604 Gene3D Phosphorylase Kinase; domain 1 236 331 - -
Mtr5g0773 604 SMART serkin_6 256 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0773 Mtr-Chr5 7580040 7586482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0773 124 586 Trihelix Transcription Factor Family AT1G70460 49.485 4.10e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mtr5g0773 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0773 - - gmx:100777163 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0773 5 7580040 7586482 Mtr8g2526 8 35616488 35618854 ECH
Mtr5g0773 5 7580040 7586482 Mtr5g0773 5 7580040 7586482 ECH
Mtr5g0773 5 7580040 7586482 Mtr8g2526 8 35616488 35618854 PCT