Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0745 ATGTCTCGACGTTTCGGAGAATCAACGAAATCAGCTTCTGCATCAAATCCATCATGTTCATCAGGGAACAGTTCCAACAATGATCCTGGCGATGTTGGCGATTTCGAATGTAACATATGTTTTGATTTGGCACAGGATCCAGTGATCACACTTTGTGGTCATTTATTTTGTTGGCCATGTCTGTATAGGTGGTTACATCATCATTCCCATTCACAAGAATGTCCTGTTTGTAAAGCACTTGTTCAGGAAGAGAAATTGGTGCCTCTTTATGGTAGAGGAAAAACGCAGACGGATCCGAGAACTAAATCGTATCCGGGGATGGAGATTCCTCGTCGTCCTTCGGGACAGAGACCGCAAACCGCGCCGAATCCACCACCTCATAACAATGGGAATTTTACTGCTGGGATTGGACTGATGGGTGGATTTATTCCGACGGCTACTGCTAGATTTGGAAATTTTTCGTTTTCGCCGGGTTTTGGTGGGTTTGGCGGGTTTATCCCGTCACTTATGAATATACACTTTCATGGTTTTCAGGATGCTACTGTTTATGGGACAACTTCTGGTTATCCATTTGGGTTTAATGGGTTTCAGGGTGGGAATGCGAGAGGTTTCAATTCTCAAGCGACAGGACAAGTGCAACGGCAGGAGGATAATTGTTTGAAGAATTTGCTTATGCTGATTGGATTTCTCGTCCTTCTTACGGTTATTTTTTTTATGTAA 720 0.4347 MSRRFGESTKSASASNPSCSSGNSSNNDPGDVGDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHSQECPVCKALVQEEKLVPLYGRGKTQTDPRTKSYPGMEIPRRPSGQRPQTAPNPPPHNNGNFTAGIGLMGGFIPTATARFGNFSFSPGFGGFGGFIPSLMNIHFHGFQDATVYGTTSGYPFGFNGFQGGNARGFNSQATGQVQRQEDNCLKNLLMLIGFLVLLTVIFFM* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0745 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 100 IPR013083 -
Mtr5g0745 239 SMART ring_2 37 77 IPR001841 -
Mtr5g0745 239 Pfam Zinc finger, C3HC4 type (RING finger) 36 77 - -
Mtr5g0745 239 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 3 237 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mtr5g0745 239 MobiDBLite consensus disorder prediction 1 27 - -
Mtr5g0745 239 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Mtr5g0745 239 ProSiteProfiles Zinc finger RING-type profile. 37 78 IPR001841 -
Mtr5g0745 239 SUPERFAMILY RING/U-box 33 90 - -
Mtr5g0745 239 CDD RING-HC_AtRMA_like 35 79 - -
Mtr5g0745 239 PANTHER RING ZINC FINGER PROTEIN-RELATED 3 237 - -
Mtr5g0745 239 MobiDBLite consensus disorder prediction 90 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0745 Mtr-Chr5 7304547 7305976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0745 23 237 C3H Transcription Factor Family AT2G23780 61.364 9.17e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0745 K10666 - gmx:100814783 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0745 5 7304547 7305976 Mtr5g0745 5 7304547 7305976 ECH