Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0735 ATGTTTCCAACATTTTCACTTTGGTTATCTTTTCTCATTGCTTTCAACTTCTTCCAAAACACATTTACTTCTACATTAGGAACTGAGACCGATAACTTGGCGTTGCTCAAGTTCAAAGAATCAATATCTAATGATCCATATGGAATCTTGGCCTCTTGGAATAGTTCAACTCACTTCTGCAAGTGGTATGGAATCACATGCAGTCCCATGCATCAAAGAGTTGCCGAGTTAAACTTGGAAGGATATCAGCTGCATGGATTGATATCTCCCCATGTTGGCAATCTCTCTTTTTTGAGAAACCTCAACCTTGCACACAATAGTTTCTTCGGAAAAATCCCACAGAAACTCGGTCAGTTGTTTCGATTGCAGGAACTCGTACTCATTGATAACTCCTTGACAGGGGAGATTCCTACAAACTTGACGAGTTGCTCTAATCTTGAATTCTTATACTTGACTGGAAATCATCTTATTGGTAAAATACCAATTGGAATAAGCTCTCTTCAAAAGCTTCAAGTGTTGGAGATTTCAAAAAACAATTTAACCGGAAGAATACCAACGTTCATAGGGAATCTTTCATGGCTAGCTATTCTTTCAGTGGGTGATAACCTCTTAGAGGGAGACATTCCACGAGAAATATGCAGCCTCAAAAACTTGACAATAATGTCAGTGTTTCTAAACAGACTATCTAATACATTACCTTCTTCTTGTCTTTATAATATGTCATCTCTTACTTTCATTTCCGCTGCATTCAATAATTTTAATGGATCTCTTCCACCCAATATGTTCAACACCCTCTCCAATCTTCAATATTTAGCAATCGGAGGAAATCAATTCTCAGGTACAATCCCTATTTCCATTTCAAATGCTTCTTCCCTATTTAATCTTGACTTAGATCAAAACAATTTGGTCGGACAAGTTCCAAGTCTAGGGAAGTTACATGATCTTCGACGGTTAAATCTAGAGCTAAACAGTTTAGGTAACAATTCCACTAAGGATTTAGAGTTTTTAAAATCCTTGACAAACTGTAGTAAACTACTAGTGTTTTCTATATCCTTTAATAATTTTGGAGGTAATTTGCCAAATTCCATTGGGAATTTATCCACTCAACTTAGGCAACTACATCTTGGATGTAATATGATATCAGGAAAAATTCCTGAAGAATTAGGAAATCTAATTGGCTTAACTCTGTTGAGCATGGAACTTAACAACTTTGAAGGAATTATTCCTACTACTTTTGGGAAGTTTGAGAAAATGCAACTATTGGTTTTGCAGGGAAATAAGTTTTCCGGAGAGATACCACCCATCATAGGCAACCTCAGTCAATTATATCATTTGAGTGTAGGAGATAATATGTTAGAAGGAAATATTCCGTCAAGTATAGGAAACTGCAAAAAGTTACAATACCTGGACCTTGCACAAAACAATCTTAGAGGAACCATACCCTTAGAAGTTTTCAGTCTTTCTTCGTTATCAAACTTACTGAACTTGTCAAGAAACTCATTGAGTGGTAGCCTACCAAGAGAAGTGGGTATGCTAAAAAGTATCAACAAGCTAGATGTCTCGGAGAATCTTCTATCTGGTGACATTCCTAGAGCCATTGGCGAATGCATACGCTTAGAATACCTCTTTTTGCAAGGAAACTCCTTCAACGGAACCATACCATCCTCATTGGCTTCAGTTAAAAGTCTTCAATATTTAGACCTGTCAAGAAATCGGTTGTATGGACCAATTCCTAATGTTCTACAGAATATATCAGTTTTAGAACACTTGAATGTTTCTTTCAACATGTTGGAAGGCGAGGTACCAACAGAAGGTGTCTTTGGAAATGTAAGCAAGTTAGCTGTGACCGGAAACAATAAACTTTGTGGAGGTATTTCAACGCTTCGTCTACGGCCATGCCCTGTCAAAGGTATTAAACCTGCAAAACACCAAAAAATCAGGATTATAGCAGGGATTGTTAGTGCGGTATCTATTCTTCTCACGGCGACAATTATTTTAACTATCTACAAGATGAGGAAAAGAAACAAGAAACAATATTCTGATTTACTAAATATTGACCCACTAGCTAAAGTTTCATACCAGGACCTTCACCAGGGAACTGACGGGTTTTCTGCTAGAAACTTAGTTGGATCAGGAAGCTTTGGTTCTGTGTACAAAGGAAATCTTGAATCAGAAGATAAAGTTGTTGCCGTGAAGGTCATGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCACTAAAAAATATTAGACATCGAAATTTGGTTAAGATTTTGACATGTTGTTCCAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTAGTCTTTGAATACATGAACAACGGAAGCTTAGAACAATGGCTACATCCTAGATCAGTGAATGTAGAGAATCAAAGAACGTTGGACCTTGATCAAAGATTGAATATCGCTGTTGATATTGCCTTTGTATTACATTACCTTCATCTTGAATGTGAGCAATCGATCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGTTATTGACGACACCTCTCATCGAGAAACTAGTACAATTGGAATTAAAGGGACTATTGGCTATGCTCCTCCAGAATATGGAATGGGTTCTGAAGTATCTACATATGGTGATATGTATAGCTTCGGGATGCTTTTGTTGGAAATTCTTACCGGAAGGAGACCGGTAGATGAAATGTTTGACAATGGTCAAAATCTACGTATTTTTGTTGAAATTTCGTTGCCTAATAATCTTATACATATTTTGGACCCAAATCTTGTACCAAGAAATATAGAAGCAACAATAGAAGATGGAAACAGTGGAAATTTCACTCCAAATGTAGAGAAGTGCGTAGTTTCACTTTTTAGGATTGGACTTGCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAATATAGTGGATGTCATCAGAGACTTAAGCATAATCAAAAACGCTTATCTCGCTGGTGTTCACACTCGTGACTAG 3054 0.3713 MFPTFSLWLSFLIAFNFFQNTFTSTLGTETDNLALLKFKESISNDPYGILASWNSSTHFCKWYGITCSPMHQRVAELNLEGYQLHGLISPHVGNLSFLRNLNLAHNSFFGKIPQKLGQLFRLQELVLIDNSLTGEIPTNLTSCSNLEFLYLTGNHLIGKIPIGISSLQKLQVLEISKNNLTGRIPTFIGNLSWLAILSVGDNLLEGDIPREICSLKNLTIMSVFLNRLSNTLPSSCLYNMSSLTFISAAFNNFNGSLPPNMFNTLSNLQYLAIGGNQFSGTIPISISNASSLFNLDLDQNNLVGQVPSLGKLHDLRRLNLELNSLGNNSTKDLEFLKSLTNCSKLLVFSISFNNFGGNLPNSIGNLSTQLRQLHLGCNMISGKIPEELGNLIGLTLLSMELNNFEGIIPTTFGKFEKMQLLVLQGNKFSGEIPPIIGNLSQLYHLSVGDNMLEGNIPSSIGNCKKLQYLDLAQNNLRGTIPLEVFSLSSLSNLLNLSRNSLSGSLPREVGMLKSINKLDVSENLLSGDIPRAIGECIRLEYLFLQGNSFNGTIPSSLASVKSLQYLDLSRNRLYGPIPNVLQNISVLEHLNVSFNMLEGEVPTEGVFGNVSKLAVTGNNKLCGGISTLRLRPCPVKGIKPAKHQKIRIIAGIVSAVSILLTATIILTIYKMRKRNKKQYSDLLNIDPLAKVSYQDLHQGTDGFSARNLVGSGSFGSVYKGNLESEDKVVAVKVMNLQKKGAHKSFIAECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFEYMNNGSLEQWLHPRSVNVENQRTLDLDQRLNIAVDIAFVLHYLHLECEQSIIHCDLKPSNVLLDDDMVAHVSDFGIARLVSVIDDTSHRETSTIGIKGTIGYAPPEYGMGSEVSTYGDMYSFGMLLLEILTGRRPVDEMFDNGQNLRIFVEISLPNNLIHILDPNLVPRNIEATIEDGNSGNFTPNVEKCVVSLFRIGLACSVESPKERMNIVDVIRDLSIIKNAYLAGVHTRD* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0735 1017 Pfam Protein tyrosine and serine/threonine kinase 707 946 IPR001245 GO:0004672|GO:0006468
Mtr5g0735 1017 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
Mtr5g0735 1017 PANTHER LRR RECEPTOR-LIKE KINASE 18 1011 - -
Mtr5g0735 1017 SUPERFAMILY Protein kinase-like (PK-like) 678 1004 IPR011009 -
Mtr5g0735 1017 SMART serkin_6 703 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0735 1017 SUPERFAMILY L domain-like 368 623 - -
Mtr5g0735 1017 SUPERFAMILY L domain-like 29 325 - -
Mtr5g0735 1017 Gene3D Transferase(Phosphotransferase) domain 1 785 1012 - -
Mtr5g0735 1017 ProSiteProfiles Protein kinase domain profile. 703 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0735 1017 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Mtr5g0735 1017 Gene3D Ribonuclease Inhibitor 141 234 IPR032675 -
Mtr5g0735 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Mtr5g0735 1017 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Mtr5g0735 1017 Gene3D Phosphorylase Kinase; domain 1 684 784 - -
Mtr5g0735 1017 Gene3D Ribonuclease Inhibitor 236 633 IPR032675 -
Mtr5g0735 1017 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Mtr5g0735 1017 PANTHER OS04G0122200 PROTEIN 18 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0735 Mtr-Chr5 7198397 7202127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0735 3 360 Receptor kinase-like Gene Family AT3G47570 29.144 5.00e-26 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr5g0735 PK_Tyr_Ser-Thr 3.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0735 - - gmx:100785561 1310.05