Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0733 ATGCATCTCTTTCCCTTCATCCCTTTTTTCATTTTCAATCTCTTCTTCTTCTTCTTCGTCAGCAACATCTCCATCATCCTAGGACAACAACCTTATATTGGTTTAGCAACAAATGCATGTCCACGAAAAGGCGATTCAAAATCAATCCGAGGTTACACATGTAACGGCAAAACTCAAACATGCCAAGCATACCTCACCTTCAGAACTCAACCAATTTACTCCTCAGTTTCAACAATATCATCATTACTAGGCTCAAATCCATCTCAACTCGCCGAAATAAACTCCGTTTCTTTAAACGAAACATTCGAAACAAACAAAATGGTAATTGTTCCTGTCAATTGTTCTTGTTCTGGTAACTATTATCAAGCAAATACATCCTATGTTTTTCAAAACACAGACACTTATTTTATAGTTGCTAACAACACTTTTGAAGGACTTTCAACATGTCAAGCTTTGATGCATGAAAATCATAATCCTGGTGATGTATATCCTGGTAGAAAACTACTTGTTCCTCTTAGATGTGCTTGTCCTACAAAGAATCAAACTCAGAAAAACATAAAGTATCTTTTGAGTTATTTGGTTGATTGGGGTGATTCTGTTTCATTCATTAGTGATAAATTTGGTGTTAACTTTAGAACCACTCTTGAAGCTAATACACTTTCTTTAACACAATCTACAATTTATCCCTTTACAACACTTCTTGTTCCTCTTTTTGATAAGCCCTCAAGTTCTCAAATTCAAACACATCATTCTCCTTCATCATCCCCACCTTTATCTTCTTCTTCTTCGACCGACAAAAAATCGAAAAAAACTTGGGTTTATGTTGTTGTTGGAGTACTTGGAGGAGTTGTAATTGTAGCTTTAATATTATTTTTATATGCTTTCATTTCCTTCAAAAAGGGTAAAAAGAAAAATGATTTTTTGGTGAGTGTTTCTGAAAGTACTATTTTTGAGGAAAAAGAGAAACCAATGAAGAAAGAAGATGAAAAATTGTCTGAGATTATATGTGGTATAGCTCAATCTTTCAAAGTGTATGATTTTGAGGAAATTAAGGTTGCAACTGATAATTTTAGTCCAAGTTGTCGGGTTAAAGGAACTGTTTATCGCGGCCTTATTAAAGGCGATTTGGCTGCGATTAAGAAGACAGAAGGAGATGTTTCAAAAGAGATACAAATTCTAAACAAAGTTAACCATTCCAATGTTATTCGTCTTTCCGGTGTTAGCTTCAATCAAGGACATTGGTACCTTGTTTATGAGTATGCTGCTAATGGAGCATTAAGTGATTGGTTATTTTCTAACAAAAAAATGGATGATGGAAATATTCTGAGTTGGATTCGGAGAATAAAGATTGCATTAGATGTGGCAATAGGAGTTGAATATCTTCATAGTTTCACTTCTCCTCCACATATTCATAAGGATCTAAAGTGTAGTAACATACTTCTTGATAGTGATTTTAAAGCAAAGGTTGCAAATTTAAGGCATGTAAGGTGTGTGGAAGAAGTTGAAAATGATGAAGAATTTGTTGCTACAAGACATATTGTTGGGACAAGAGGTTACATGGCTCCTGAGTATTTGGAAAATGGTCTTGTTTCTACAAAGCTTGATGTGTATGCATTTGGTATTTTGATGTTGGAAATTATTACAGGAAAAGAGGTTGGTTTTATGATATCAAAAGATAATGAGAATTTGTTGGATGTTTTGAGTGGAATACTTGGTGAGAAAAGTGGTGATGAGAAGTTGAAGGAGTTTATGGATCCTTCATTGCAAGGAAATTATCCATTTGAACTTGCTATGTTTGTGATTGAAATTATTCAGAATTGTTTAAACAAGGATCCAGGAAATAGACCTGCTATGGATGAGATTGTACCAGTTTTGTCAAGAACATTGAATTCTTCATTGAGTTGGGAAATGTAA 1914 0.3417 MHLFPFIPFFIFNLFFFFFVSNISIILGQQPYIGLATNACPRKGDSKSIRGYTCNGKTQTCQAYLTFRTQPIYSSVSTISSLLGSNPSQLAEINSVSLNETFETNKMVIVPVNCSCSGNYYQANTSYVFQNTDTYFIVANNTFEGLSTCQALMHENHNPGDVYPGRKLLVPLRCACPTKNQTQKNIKYLLSYLVDWGDSVSFISDKFGVNFRTTLEANTLSLTQSTIYPFTTLLVPLFDKPSSSQIQTHHSPSSSPPLSSSSSTDKKSKKTWVYVVVGVLGGVVIVALILFLYAFISFKKGKKKNDFLVSVSESTIFEEKEKPMKKEDEKLSEIICGIAQSFKVYDFEEIKVATDNFSPSCRVKGTVYRGLIKGDLAAIKKTEGDVSKEIQILNKVNHSNVIRLSGVSFNQGHWYLVYEYAANGALSDWLFSNKKMDDGNILSWIRRIKIALDVAIGVEYLHSFTSPPHIHKDLKCSNILLDSDFKAKVANLRHVRCVEEVENDEEFVATRHIVGTRGYMAPEYLENGLVSTKLDVYAFGILMLEIITGKEVGFMISKDNENLLDVLSGILGEKSGDEKLKEFMDPSLQGNYPFELAMFVIEIIQNCLNKDPGNRPAMDEIVPVLSRTLNSSLSWEM* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0733 637 MobiDBLite consensus disorder prediction 244 265 - -
Mtr5g0733 637 Pfam LysM domain 196 236 IPR018392 -
Mtr5g0733 637 SUPERFAMILY Protein kinase-like (PK-like) 338 623 IPR011009 -
Mtr5g0733 637 ProSiteProfiles Protein kinase domain profile. 302 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0733 637 SMART serkin_6 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0733 637 Gene3D Phosphorylase Kinase; domain 1 325 420 - -
Mtr5g0733 637 SMART LysM_2 126 171 IPR018392 -
Mtr5g0733 637 SMART LysM_2 191 236 IPR018392 -
Mtr5g0733 637 Gene3D LysM domain 191 237 IPR036779 -
Mtr5g0733 637 ProSiteProfiles LysM domain profile. 190 235 IPR018392 -
Mtr5g0733 637 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 636 - -
Mtr5g0733 637 Pfam Protein kinase domain 380 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g0733 637 Gene3D Transferase(Phosphotransferase) domain 1 422 634 - -
Mtr5g0733 637 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 15 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0733 Mtr-Chr5 7182699 7185059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0733 10 636 Receptor kinase-like Gene Family AT2G23770 41.890 2.78e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g0733 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0733 - - gmx:100815842 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0733 5 7182699 7185059 Mtr5g0733 5 7182699 7185059 ECH