Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0726 ATGGAGGTGTTGACTAAGGTGAATGGAATTCTTGAGATTTTGATGAAAATGGATCAGTTTGATAGGAATCAAATAAGGGGTTTGTGTGGTGCTCCTGAAGAGCCTGTATGCATGGGAATGGATGAACCTTTAAATAAGTTGAAGATTGAATTGATGAAAGATGGTGTTTCTGTGCTTGTTTTGACTGGTTTGGGTGGATCTGGTAAAACCACTCTTGCTAAGAAGCTCTGTTGGGAACCACAAATCAAAGGCAAGTTTGGTGAAAACATCTTCTTTGTCACCATCTCAAAAACTCCCAACTTGAAGAACATTGTGCAGGCACTATTTGAACACTGTGGATGTCGGGTTCCCGAGTTTCAAACCGATGAAGATGCAATTAACCGATTGGGACTACTGTTGAGGCAAGTTGGTAGAAATCCAATACTATTAGTCTTGGATGATGTTTGGCCTAACTCAGAAGGCCTTGTTGAGAATTTCAAATTCCAAATGTCAGATTATAAGATTTTGGTGACGTCGAGGGTTGCTTTTAGAAGATTTGGTACCCCATTCGAGTTGGATCCACTTGATCATAATCATGCAGTGTCTCTTTTCCATCACTTTGCTCAATTGAATCACAGCAGCATATACATGCCTGATCTGAATCTTGTCCATGAGATAGTGAAAGGTTGTAAGGGTTCACCATTGGCGCTTCAGCTCGTTGCTGGATCACTGTGTAAGCAGCCTTTTGAGAAGTGGCAAAATATGAAGGAACGTTTAATGAGTAAATCCATTATTGAGTCTAATAGCACCGACTTGCTTTGTTACCTTCAACAAAGTTTGGATATATCAGAGGATAAAGGGCAGCATGGTGCACTAAAGCTCCCGCATACGCAGGGTTCGGGAAGGGGTCTCACCATTTGGTGTATTGTACGCAACCTTACCCTGTTTTTACACAAGAGGCTGTTTTCGGGGGATATATCAGAGGATATCAATGAAAAAGAGTGCTCCATTGATATGGGACTATTTCCTGAAGACCAGAGGATTCATGTTCCTGCCCTCATTGATCTTCCGGCAGAACTGCTTAACTCAGATGAAGACGGTAGAGAGGCAATGGCCACCGACAATGATTTAATCACCGGAAATTTGATTAATGCCATAGCTACAAGAATCTGTGCGGGATGCAATGCTGAGATTGGCCATGGAAGATTTTTAAATTGCATGGAAGGTGACTGGCATCCACAATGCTTCACCTGTCATGCATGCCATCTGCCAATCACTGATTATGAGTTTTCCATGTCTAGCAACCGACCTTACCATAAATCCTGCTACAGGGAGAAGTATCACCCAAGATGTGATGTTTGCAAGAATTTTATCCCGGCTAATTCAGCTGGCCTCATTGAGTATAGAGCTCATCCTTTCTGGATACAAAAATACTGCCCAACACATGAGCTCGACAGCACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGCCAAAGGATTCAAAATATCTTTTTCTTGATGATGGTCGAAAGCTATGTCTTGAGTGTCTAGACTCGGCAATTATGGACAGTCATGAATGCCAACCTCTCTACCATGAAATACTAGAATTTTATGAAGGTTTAAATATCAAAGTGGAGCCGCAAGTTCCTATACTTTTGGTGGAAAGACAAACAATAAAAGAGGCCATAGAGGGAGAAAAGAATGGTCATTACCATTTACCTGAAACTAGAGGGCTCTGCTTGTCAGAAGAACAAACTGTCACCACCATTTTAAGAAGACCAATTATAGGGGCAGGATACCGAGTCACAGACATGATAACCAAACCTTATAGACTGACCCGTCGATGCGAAGTGACGGCCATTCTTGTTTTGTATGGCCTTCCTAGATTGTTGACAGGATCAATCCTAGCTCATGAGATTATGCATGCATGGCTCAGGCTTAAAGGTTATCCCAACTTGAGGCCAGACGTTGAAGAAGGAATCTGTCATATCTTGGCTCATATGTGGTTAGGATCAGAGCTCTATTCTGGGTCTGGGAATAATGATGCACCATGTTCATCTTCATCATCATCAATGCCGCCTTCTTCTTCTGCATCATCGAAGAAGGGTAAAAGGTCTGATTTTGAGAAGAAACTTTGCGAGTTTTTCAAAAACCAGATTGAGTCGGATACCTCACCAGCCTATGGAGATGGATTCAGATCGGGTTACCAGGCGGTACTTAAGTATGGGCTCGAAAGCACCCTTGATCATATCCATTTGACCGGAACTTTTCCATGTTGA 2259 0.4241 MEVLTKVNGILEILMKMDQFDRNQIRGLCGAPEEPVCMGMDEPLNKLKIELMKDGVSVLVLTGLGGSGKTTLAKKLCWEPQIKGKFGENIFFVTISKTPNLKNIVQALFEHCGCRVPEFQTDEDAINRLGLLLRQVGRNPILLVLDDVWPNSEGLVENFKFQMSDYKILVTSRVAFRRFGTPFELDPLDHNHAVSLFHHFAQLNHSSIYMPDLNLVHEIVKGCKGSPLALQLVAGSLCKQPFEKWQNMKERLMSKSIIESNSTDLLCYLQQSLDISEDKGQHGALKLPHTQGSGRGLTIWCIVRNLTLFLHKRLFSGDISEDINEKECSIDMGLFPEDQRIHVPALIDLPAELLNSDEDGREAMATDNDLITGNLINAIATRICAGCNAEIGHGRFLNCMEGDWHPQCFTCHACHLPITDYEFSMSSNRPYHKSCYREKYHPRCDVCKNFIPANSAGLIEYRAHPFWIQKYCPTHELDSTPRCCSCERMEPKDSKYLFLDDGRKLCLECLDSAIMDSHECQPLYHEILEFYEGLNIKVEPQVPILLVERQTIKEAIEGEKNGHYHLPETRGLCLSEEQTVTTILRRPIIGAGYRVTDMITKPYRLTRRCEVTAILVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLRPDVEEGICHILAHMWLGSELYSGSGNNDAPCSSSSSSMPPSSSASSKKGKRSDFEKKLCEFFKNQIESDTSPAYGDGFRSGYQAVLKYGLESTLDHIHLTGTFPC* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0726 752 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 411 465 - -
Mtr5g0726 752 Gene3D - 187 268 IPR042197 -
Mtr5g0726 752 CDD AAA 59 181 - -
Mtr5g0726 752 Gene3D Cysteine Rich Protein 374 442 - -
Mtr5g0726 752 CDD LIM_DA1 384 436 - -
Mtr5g0726 752 MobiDBLite consensus disorder prediction 676 697 - -
Mtr5g0726 752 Pfam Protein DA1 533 746 IPR022087 -
Mtr5g0726 752 PANTHER PROTEIN DA1-RELATED 2 381 751 IPR045218 -
Mtr5g0726 752 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 381 751 - -
Mtr5g0726 752 SMART lim_4 383 435 IPR001781 -
Mtr5g0726 752 Pfam NB-ARC domain 42 277 IPR002182 GO:0043531
Mtr5g0726 752 Pfam LIM domain 384 439 IPR001781 -
Mtr5g0726 752 ProSiteProfiles LIM domain profile. 382 442 IPR001781 -
Mtr5g0726 752 MobiDBLite consensus disorder prediction 676 694 - -
Mtr5g0726 752 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 379 409 - -
Mtr5g0726 752 PRINTS Disease resistance protein signature 58 73 - -
Mtr5g0726 752 PRINTS Disease resistance protein signature 135 149 - -
Mtr5g0726 752 PRINTS Disease resistance protein signature 223 237 - -
Mtr5g0726 752 ProSitePatterns LIM zinc-binding domain signature. 384 418 IPR001781 -
Mtr5g0726 752 Gene3D - 26 178 IPR027417 -
Mtr5g0726 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0726 Mtr-Chr5 7102638 7114672 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr5g0726 NB-ARC 3.5e-28 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0726 - - mtr:MTR_5g018910 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0726 5 7102638 7114672 Mtr5g0726 5 7102638 7114672 ECH
Mtr5g0726 5 7102638 7114672 Mtr8g2550 8 35877949 35882344 PCT