Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0724 ATGGGAGTAGCATCACCAGTACCATTTCCTTCCTCTTCTTCTTATTCTTCCATTATTCAGTTGAAGACACACCAAAACCAAAGAACCTTGGATTGTTCAACTTCAAATTCTATGTCCCAAGATTATCAGCAAGCAATCTTCGGCTTCTCCTCGAATGGATTCGAGAGATCATCGTCGTCACAACAGCAGCAACAGCAGCAGCAACAGATCCAAAGGGACAAAGTTAGGCTGCTTCAAGGGTTGAATTTATCAGAAGGAGAAGGAGATGAAAGAGGAGGTGTGTATGAAACTGCAGGTATGTTATCAGAGATGTTTAATTTTGCTGATCCTTCAACAGCTGAATTGTTAGAAACCGCGACGTTTCGTTCTTCGTCTTCTTCTTCTTCAAGACAACTACCACAAACAACAGCTTCAGAAAATGATTGGTATGGTAATAATAACAGACAAGGGATTCAGCAGCATCAGCAACAGATTTCAAGCATTAATGTAGCAGATGATTCTGCAGCTGCCATGCAACTTTTTCTCATGAACCCTTCTCAATCTCATCAAACAACAACTTCATCATCTTCTCCTCCTCCAACTCATCATCAAAATTCTTCAACTCTTCACATGTTACTCCCTAACCCTCCTAATAATTCCTTACAAGGTTTTCCAAATTCTGGTAATTTTGGACAATTCACATGGAATAGTACTACCACTACTCATCAAGAAGGTGCGGTTGAAGGACAAAGTGTTCAAGGTCTTTCATTATCATTATCTTCATCATTGGAAGCTGCAAAAGCCGAGGAAGAATTGCGAATGGGAGGAGGAGGAGGAGATGGTGGTAGTTTTATGTATAATAATTACAATATTCAAGGTGGAAGTGGAGGACCATCTTCTTCAACATATCCGTACAAATTAAATCATCAACAAGCATTGAATTTACAATTGCAAGGAGGAGGGACCATTAATGGATACCAATTATTACAAAGTCATAATCAAGGTCAAGGATATGGAAGTGTAGTAGTAAATGTTTTAAGAAATTCAAAATATATGAAACCTACTCAAGAATTGCTTCAAGAGTTTTGCAGTGTTGGAAGGGGTCAGTTTATTAAAAAGACTAAGTTCAATAGACAAAATTCATCAAACCCTAACAATTGTTCCTCCAATGTTGGTGATTCTATTCCTTCTTCTTCATCAAAAGACACTCCTCCTCTTCCTTTGTCAGCTGCTGATAGGATTGAACATCAAAGAAGGAAGGTCAAGCTTCTTTCCATGCTTGATGAGGTGGACAGGAGATACAATCACTATTGTGAACAAATGCAAATGGTAGTGAACTCATTTGATGTGATGATGGGTTTTGGAGCAGCAGTTCCATACACAGCACTAGCACAAAAAGCAATGTCTCGACATTTTCGGTGTCTAAAGGATGCAATAACAACACAAGTGAAGCAAAGTTGTGAGTTACTAGGTGAGAAAGAAGGTGCAGGAGGAGGTTTAACCAAAGGTGAGACCCCTAGGCTTAAGGTACTTGAACAAAGCCTAAGACAACAAAGAGCATTTCACCAGATGGGTATGATGGATCAAGAAGCTTGGAGACCACAAAGAGGCTTGCCTGATCGTTCTGTCAATGTTTTGAGAGCTTGGCTTTTCGAGCATTTTCTACACCCGTATCCAAGTGATGCAGATAAGCATCTATTGGCACGACAAACTGGGCTATCACGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTAGATTGTGGAAACCTATGGTAGAAGAGATGTACCAACAAGAACTTAATGAAGCAGAGGTTGAAGCAGAAGACAGAGAAATGAACCAAAGCAATAGCAACAACAGTGGTCACCAAACACAAACACCACCAACATCAACAGCAACAGCAACAGAGCCACCACCACCCCAAAAAAGATCTGATATCAATGCAGCTGAAAACGACCCTTCACTAGTTGCAATCAATAGACAGCAAGACTTCTCAGAAAACCAAGCAATGCAATCCACAACCACCATAAACACCACCGTCTCTGAGGTGGTGGTTCCACCCTTTGATTCAGACCTGCCACCACACAGATCAATGGCCATGGATGACACGTGTCGATATGGAAGCTTAGTTGCAGAAGATTATGAAACAGGTTCTGACATTGGATCATCAACTCTTATTAGGTTTGGGTCCACTACTGGTGACGTGTCACTCACGTTAGGGTTACGCCATGCTGGCAATGTGCATGATAAAAATAATAACTTTCTCTATTAG 2256 0.4069 MGVASPVPFPSSSSYSSIIQLKTHQNQRTLDCSTSNSMSQDYQQAIFGFSSNGFERSSSSQQQQQQQQQIQRDKVRLLQGLNLSEGEGDERGGVYETAGMLSEMFNFADPSTAELLETATFRSSSSSSSRQLPQTTASENDWYGNNNRQGIQQHQQQISSINVADDSAAAMQLFLMNPSQSHQTTTSSSSPPPTHHQNSSTLHMLLPNPPNNSLQGFPNSGNFGQFTWNSTTTTHQEGAVEGQSVQGLSLSLSSSLEAAKAEEELRMGGGGGDGGSFMYNNYNIQGGSGGPSSSTYPYKLNHQQALNLQLQGGGTINGYQLLQSHNQGQGYGSVVVNVLRNSKYMKPTQELLQEFCSVGRGQFIKKTKFNRQNSSNPNNCSSNVGDSIPSSSSKDTPPLPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVMMGFGAAVPYTALAQKAMSRHFRCLKDAITTQVKQSCELLGEKEGAGGGLTKGETPRLKVLEQSLRQQRAFHQMGMMDQEAWRPQRGLPDRSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELNEAEVEAEDREMNQSNSNNSGHQTQTPPTSTATATEPPPPQKRSDINAAENDPSLVAINRQQDFSENQAMQSTTTINTTVSEVVVPPFDSDLPPHRSMAMDDTCRYGSLVAEDYETGSDIGSSTLIRFGSTTGDVSLTLGLRHAGNVHDKNNNFLY* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0724 751 MobiDBLite consensus disorder prediction 179 204 - -
Mtr5g0724 751 Coils Coil 588 608 - -
Mtr5g0724 751 Gene3D - 528 590 - -
Mtr5g0724 751 SMART prehox3 333 474 IPR006563 -
Mtr5g0724 751 MobiDBLite consensus disorder prediction 607 635 - -
Mtr5g0724 751 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 84 743 - -
Mtr5g0724 751 MobiDBLite consensus disorder prediction 53 72 - -
Mtr5g0724 751 MobiDBLite consensus disorder prediction 119 159 - -
Mtr5g0724 751 SMART HOX_1 525 589 IPR001356 GO:0003677
Mtr5g0724 751 ProSiteProfiles 'Homeobox' domain profile. 522 585 IPR001356 GO:0003677
Mtr5g0724 751 SUPERFAMILY Homeodomain-like 526 592 IPR009057 -
Mtr5g0724 751 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 84 743 - -
Mtr5g0724 751 MobiDBLite consensus disorder prediction 368 398 - -
Mtr5g0724 751 MobiDBLite consensus disorder prediction 598 642 - -
Mtr5g0724 751 CDD homeodomain 525 586 IPR001356 GO:0003677
Mtr5g0724 751 Pfam Associated with HOX 338 473 IPR006563 -
Mtr5g0724 751 Pfam Homeobox KN domain 542 581 IPR008422 GO:0003677|GO:0006355
Mtr5g0724 751 MobiDBLite consensus disorder prediction 368 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0724 Mtr-Chr5 7066699 7075803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0724 1 572 Homeobox Transcription Factor Family AT4G36870 50.000 1.28e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mtr5g0724 POX 3.1e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0724 - - gmx:100786231 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0724 5 7066699 7075803 Mtr5g0724 5 7066699 7075803 ECH
Mtr5g0724 5 7066699 7075803 Mtr8g2551 8 35927218 35936244 ECH
Mtr5g0724 5 7066699 7075803 Mtr8g2551 8 35927218 35936244 PCT